FMO01279.5prime Sequence
398 bp (398 high quality bases) assembled on 2008-03-12
> FMO01279.5prime
CAGTCGACATGGTACAGCAGGGCCTCGATGCGACGAACTTTGGTCTGCGG
AGCGACTACTCCAGTGAGAACGGCGATCATCCATCGTTGTTCGATACGAT
TAAGGATGGGGATCAGCCGGATATGTGTGCCTTTTGCCTGGATCGCATAC
AGAATCCAGAGAAGCTGCACTGCAATCATGCGTTCTGCAAAAGCTGTTTA
GCACTGTACAGGGAAGCTCGCAACTGGGTGGCCAAGCGTTGCCCAATCTG
TCGGAGCAGCCTGGACATGGATGGCCAGGTGTCCAGGCAGTTCCACGATA
ACTGGCGTCTATTTGGTATTATGATGGTACCGCTGATGGTGCTCAGTCTG
GGCCCCTTTTATTTGCTGTTGCTTTACTGGGCAAGCTTTCTAGACCAT
FMO01279.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17048-RB | 712 | CG17048-RB | 167..538 | 9..380 | 1860 | 100 | Plus |
CG17048-RA | 592 | CG17048-RA | 167..538 | 9..380 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13354043..13354333 | 299..9 | 1455 | 100 | Minus |
2R | 25286936 | 2R | 13353812..13353892 | 380..300 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:46:40 has no hits.
FMO01279.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:43:30 Download gff for
FMO01279.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17048-RA | 1..375 | 9..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:46 Download gff for
FMO01279.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17048-RA | 185..566 | 1..388 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:37 Download gff for
FMO01279.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17048-RA | 163..544 | 1..388 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:37 Download gff for
FMO01279.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13353806..13353892 | 300..388 | 95 | <- | Minus |
2R | 13354043..13354337 | 1..299 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:46 Download gff for
FMO01279.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9241311..9241397 | 300..388 | 95 | <- | Minus |
arm_2R | 9241548..9241842 | 1..299 | 98 | | Minus |