FMO01280.5prime Sequence
572 bp (572 high quality bases) assembled on 2008-03-12
> FMO01280.5prime
CAGTCGACATGTCGAAGCCGACAACCCTAAAGGACGCATTGGCCAAGTGG
GAGGACCGCAATAAGCAGCCAGCCGCCACTGCCACGGAAATTGGACTTCA
GTTTCAGTATCCGCCGATCGAGAAAATGGATCCGATTCTCAATTCCCTTA
CCGAGTGCCAAAAGCTCAGCTTGTCCTCAAATATGATTGAGAAGATTACT
GGAATTTCGGGAATGAAGAACCTGAAAGTCCTGAGCCTGGCACGTAACAA
TCTTAAAACGCTCAACGGCATAGAACCACTGGCCGATACTCTGGAGGAAT
TGTGGGTCAGCTACAACAACATCGAGAAGACCAAGCCCCTGGAATCGATG
AAGGCCCTGCGTGTGTTTTACATATCCTTTAATATGATCAAGGACTGGAC
GGAGTTCATGCGCATGGGTGTTCCACCAAATCTCAGCGAGATCACATTTG
TGGGAAATCCTTTGAACGAGAACATGGACCAGTCTGCCTTCACTGCCGAG
GCAGTCCGTCGTCTGCCCAACATGAAGAAACTCGATGGGGAGCCTGTCAT
TCGTGCAAGCTTTCTAGACCAT
FMO01280.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10839-RB | 1300 | CG10839-RB | 86..632 | 8..554 | 2735 | 100 | Plus |
| CG10839-RC | 1023 | CG10839-RC | 86..632 | 8..554 | 2735 | 100 | Plus |
| CG10839-RA | 692 | CG10839-RA | 86..632 | 8..554 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15979571..15980117 | 8..554 | 2735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:21:45 has no hits.
FMO01280.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:24:32 Download gff for
FMO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 5..561 | 1..555 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:48 Download gff for
FMO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 79..632 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:54 Download gff for
FMO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 79..632 | 1..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:54 Download gff for
FMO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15979564..15980121 | 1..559 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:48 Download gff for
FMO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15979564..15980121 | 1..559 | 98 | <- | Plus |
