FMO01281.5prime Sequence
275 bp (275 high quality bases) assembled on 2008-03-12
> FMO01281.5prime
AAAAAACCAAGTTATCAGTCGACATGTTCACCGAAACCGCTCTTGTTTCC
AACTTCAATGGAGTGACAGAGAAGAAATCTCTTACCGGCGCCTCCACCAA
CCTGAAGAAGCTGCTGAAGACCATCAAGAAGGTCTTCAAGAACTCCAAGC
CTTCGAAGGAGATTCCGATCCCCAACATCATCTACTCTTGCAATACTGAG
GAGGAGCACCAGAATTGGCTCAACGAACAACTGGAGGCCATGGCAATCCA
TCTTCACGCAAGCTTTCTAGACCAT
FMO01281.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BobA-RA | 627 | CG12487-RA | 58..291 | 24..257 | 1170 | 100 | Plus |
| CG13465-RA | 602 | CG13465-RA | 40..273 | 24..257 | 1125 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14945835..14946068 | 257..24 | 1170 | 100 | Minus |
| 3L | 28110227 | 3L | 14944059..14944292 | 257..24 | 1125 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:25:17 has no hits.
FMO01281.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:43:33 Download gff for
FMO01281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12487-RA | 45..284 | 24..265 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:40 Download gff for
FMO01281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BobA-RA | 58..297 | 24..265 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:32 Download gff for
FMO01281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BobA-RA | 58..297 | 24..265 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:32 Download gff for
FMO01281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14945829..14946068 | 24..265 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:40 Download gff for
FMO01281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14938929..14939168 | 24..265 | 98 | | Minus |
