FMO01283.5prime Sequence
1118 bp (990 high quality bases) assembled on 2008-03-12
> FMO01283.5prime
CAGTCGACATGGATAATGGGGAGGAGACCATGTTGCATCTGCCCAGCTAT
GCTGATCGCTATACGGACATTCCCCGGCTTATCCGATTGAAGTTCATTGC
CCAGGTCTGTCCGGAGCTAAGTGTTCTTGCCCTCGAGTTGGCCCTCAATC
ATGTGAAGACCACCTACAATGTCAAGTTGTACGACGAACTCTACAAAACA
CTGTGCGTTGAGGTGGACAGGAAGTACCCCAACCAGTCCAAGGGGAACGA
AGAACTTCATACCACTGGTGGAAGCGAGCCAAGTACGTCGAGTGGCAGGG
GGAGAGTTGTGGTTCCCTATGATTCCTACTGGGTGGAGGACAACATTATG
GAGGCCACTCTGATGCTTCAGGAACTAGACGCCGAACTGAACTTCAAGAA
ATCGAATTCGGGCAGCTCCTATGTGCGACGCATTCTAGAGGAGATCGGGG
ATCACCACGAGAAGAGTGGAAACTTGCAGATGGCGGTCAAGTTTTATGCT
CGAGCCAGGCCCTACTGTACCAGCAGCGAGAATGTCATCAATATGTTCCG
GAATCTGATTAGGGTATCAATTTATATGGAAAATTGGTGGCATGTCCTCA
CCTACATTGACGAGGCCAAGCAGTATGCCTATGGCTTTGAAAATCTGGCC
CAGGAGGTTCCAGCACGTCTAAGCTGCGTCGCCGGTTTGGCTCATTTGGG
CCTAAAGATATACAAGTCTGCTGCCCAATATTTCCTGAGTACTCCGTATG
GGCGTTACGACTACGATAAAATCGTGGCACCCGAAGATGTTACTTTATAT
GCTGGCCTTTGCGCTCTAGCCACTTTCGATCGGGAAACCTTACAGCTGAC
GCTATCAACTCGGAGCATTTAAGCCATTCTTTCAGCTTTCGCCAAAATGT
GACCATATTGGCCAAATTCTACGCGGGGGATTCGATGCCTGTATGACCCT
GTTGCGCGAAATCGAAATCATGTTAGGCTGGATGTTTATTTGTCTCCCAT
GTTAGTGCGCTTTACGATTTGATAATGCCAAATGCTGAAAAAAGAAAGGA
GTTATGACGATCTGTGGAAAAGCGAATCAAAGCAGCTTTCTAGAACCATC
TCGTTTGTGCGGCCGACT
FMO01283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN1a-RA | 1301 | CG4697-RA | 96..1178 | 8..1074 | 5020 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14762860..14763886 | 8..1027 | 4785 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:07 has no hits.
FMO01283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:43:21 Download gff for
FMO01283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4697-RA | 1..1049 | 9..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:35 Download gff for
FMO01283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..1145 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:24 Download gff for
FMO01283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..1145 | 1..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:24 Download gff for
FMO01283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14762854..14763888 | 1..1029 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:35 Download gff for
FMO01283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14762854..14763888 | 1..1029 | 98 | <- | Plus |
