FMO01285.5prime Sequence
308 bp (308 high quality bases) assembled on 2008-03-12
> FMO01285.5prime
AAAAAACAAAGTTATCAGTCGACATGTCTGATCGCAAGGCCGTGATTAAA
AATGCCGACATGAGCGAGGAGATGCAGCAGGATGCCGTCGATTGTGCGAC
ACAGGCCCTCGAGAAGTACAACATTGAAAAGGACATTGCGGCCTACATCA
AGAAGGAGTTCGACAAAAAATACAATCCCACATGGCATTGCATTGTCGGT
CGCAACTTTGGATCGTATGTCACACACGAGACGCGCCACTTTATTTACTT
CTATTTGGGCCAGGTGGCTATTTTACTGTTTAAGAGCGGTGCAAGCTTTC
TAGACCAT
FMO01285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ctp-RE | 4061 | CG6998-RE | 216..482 | 24..290 | 1335 | 100 | Plus |
ctp-RC | 4416 | CG6998-RC | 571..837 | 24..290 | 1335 | 100 | Plus |
ctp-RA | 1483 | CG6998-RA | 216..482 | 24..290 | 1335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4698295..4698455 | 130..290 | 805 | 100 | Plus |
2L | 23513712 | 2L | 1344616..1344882 | 24..290 | 720 | 84.6 | Plus |
X | 23542271 | X | 4691737..4691845 | 24..132 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:19:16 has no hits.
FMO01285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:45 Download gff for
FMO01285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6998-RC | 501..780 | 16..295 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:11 Download gff for
FMO01285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ctp-RA | 208..487 | 16..295 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:03 Download gff for
FMO01285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ctp-RA | 208..487 | 16..295 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:03 Download gff for
FMO01285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4691730..4691844 | 17..131 | 97 | -> | Plus |
X | 4698297..4698460 | 132..295 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:11 Download gff for
FMO01285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4585763..4585877 | 17..131 | 97 | -> | Plus |
arm_X | 4592330..4592493 | 132..295 | 98 | | Plus |