FMO01291.5prime Sequence
395 bp (395 high quality bases) assembled on 2008-03-12
> FMO01291.5prime
TTTATACGAAGTTATCAGTCGACATGGACGTGTTCCTTATGATCAGGCGG
CAAAAGACCACCATCTTCACGGACGCCAAGGAGAACACAACGGTGGCCGA
GCTGAAGCGAATGATTGAGGGCATACTAAAGGTGCAGCCCGTGGACCAGC
GGTTATACAATCAGGACAACGATGTCATGGAGGACGACAGCACGTTGCAG
GACTACGGCGTGACGGTGTCCACGGCCAAGGCGCAGGCTCCGGCACAGCT
GGGCTTGACATTCAGGAACGAGGTGGGCGACTTTGAGACACTGGACATGA
CACCCTACTCGGCACCACCAGACTTACCCGAAGTCATGAAAAACCAAGAG
GCCTCGAACGGACAGGAGCAGGTGGCAGCAAGCTTTCTAGACCAT
FMO01291.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EloB-RA | 1207 | CG4204-RA | 395..748 | 24..377 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20578913..20579059 | 266..120 | 735 | 100 | Minus |
3R | 32079331 | 3R | 20578681..20578794 | 377..264 | 570 | 100 | Minus |
3R | 32079331 | 3R | 20579138..20579233 | 121..26 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:19:09 has no hits.
FMO01291.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:45:06 Download gff for
FMO01291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4204-RA | 408..773 | 15..382 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:06 Download gff for
FMO01291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Elongin-B-RA | 387..752 | 15..382 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:57 Download gff for
FMO01291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EloB-RA | 387..752 | 15..382 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:57 Download gff for
FMO01291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20578677..20578792 | 266..382 | 98 | <- | Minus |
3R | 20578914..20579058 | 121..265 | 100 | <- | Minus |
3R | 20579139..20579242 | 15..120 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:06 Download gff for
FMO01291.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16404399..16404514 | 266..382 | 98 | <- | Minus |
arm_3R | 16404636..16404780 | 121..265 | 100 | <- | Minus |
arm_3R | 16404861..16404964 | 15..120 | 95 | | Minus |