FMO01301.5prime Sequence
856 bp (779 high quality bases) assembled on 2008-03-18
> FMO01301.5prime
AAAAAACAAAGTTATCAGTCGACATGACGAGCATTTGCAGCACCAAATTC
CAGCAGCAGCATTACCAGCTGACCAACAGTAACATTTTCTTGCTGCAACA
TCAGCATCACCATCAAACGCAGCAGCACCAGTTGATTGCTCCGAAAATAC
CTTTGGGTACCAGCCAACTGCAGAATATGCAGCAGAGTCAACAGTCCAAT
GTTGGACCCATGTTGTCCTCCCAGAAGAAGAAGTTCAACTACAATAACAT
GCCCTATGGCGAGCAATTGCCATCGGTAGCCAGACGAAATGCCCGTGAAC
GCAATCGCGTGAAGCAGGTGAACAATGGATTCGTCAATCTCCGCCAGCAT
TTGCCTCAAACTGTGGTAAACTCGCTGTCCAATGGAGGACGTGGTAGCAG
CAAGAAGTTATCCAAGGTGGACACACTGCGAATCGCCGTTGAATATATTC
GAGGACTACAGGACATGCTTGATGATGGCACTGCTTCATCAACTCGTCAC
ATCTACAATTCCGCCGATGAAAGTAGCAACGATGGCAGCAGCTATAACGA
TTACAACGATAGTTTGGACAGTTCGCAACAGTTCTTGACGGGAGCCACCC
AGTCTGCCCAATCCCACTCGTACCACTCCGCCTCGCCCACGCCGTCGTAC
TCCGGATCCGAGATTTCCGGAGGTGGCTATATCATACAGGAACTACAAGA
TCAGGACCTCAAATTCGACTCCTTTGATAGCTTCAGTGACGAGCAGCCAG
ATGACGAGGAGCTACTTCGATTAATATTTCATCTTGGCAAGAGCAGCAAG
CTTTCTAGACCATTCGTTTGGGCGCGCGAGCCCGGGAAGTGGTTATAATC
ATAATC
FMO01301.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)sc-RA | 1097 | CG3839-RA | 75..846 | 23..796 | 3775 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 409795..410566 | 23..796 | 3725 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:26:53 has no hits.
FMO01301.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:46:14 Download gff for
FMO01301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3839-RA | 73..849 | 23..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:52 Download gff for
FMO01301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)sc-RA | 73..849 | 23..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:49 Download gff for
FMO01301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)sc-RA | 75..851 | 23..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:49 Download gff for
FMO01301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 409795..410571 | 23..800 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:52 Download gff for
FMO01301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 303828..304604 | 23..800 | 99 | | Plus |
