FMO01308.5prime Sequence
1169 bp (1000 high quality bases) assembled on 2008-03-18
> FMO01308.5prime
CAGTCGACATGGCCCAGATACAGACACCGATACCGATTCCAGCCCCCGCG
GAGCCCATTGAAAAGCTCAGCCACCCGCACAGCATTGGCATCCAGTTGCA
GCACAAGGGGATGCCCCATGGCCTGGGCCTGCTGACCACAGTGGCCTCGC
TGCCCCCCAAGTACCGCAGTCGATATCTGAACCTGAAAACCAGGTGCGAA
ATACCGCTGGATCTAACGCTGAAGCTTCCCTCACCACTGCCCAGCAGCGA
TGTGCCCATGGCGGCCACATTCGCGGAGGTCTATAGCGAAAATACGAGTG
CTAGTTCCAGCGAGGTGCAGGGGGAGGTGACCAAGGTGGAGGAGCTGCCG
GTGAAGCCCCCAACACCACCGCAGAGTCCAGCAGGGAAGCGTAAATTGAG
CCGGGAGAGCTATGACGACGAGCCGGCTAAAATGGCCAAAAAGGAGGAGG
AGGTTCCGGTGGAAACAGTAGAATCCACACCAGCGAAACCCGTCAAAGTG
GCAGAATCTGCGCCTAAAACCAACAAGGCCTCCACTTCCTCGGGAAAGCC
CTCCCGCAATAAAGCCACCCGCAAGCTGAAGTTCGATGAGGAGACCAGTT
CCCCCGTCTCGGGCACCGTCATCCGACCGCTCGAGGACATCACCGATGGA
TCGATGCAGTACAGCAACGGCGACATTGACCCCAAGTACAACATAGTCGA
GATCACGGAGGAGACCAAGGCGGAACTGGCCGCCATCAAGAACGTGATCG
GGGACTATGTCTGCCGACTGTGCAAGATCAAGTTCGAGGACGCCTTCGGC
CTGGCCCGGCACAGGTGCGCCTGCATCGTCCTGCTGGAGTACCGGTGTCC
CGAGTGCGGCAAGCAGTTCAATTGTCCTGCTACTTGGCCTCCCATCGCCG
GTGCACAGCCGAGGAAGGAGGCGTCTAAAAGGAGATCGCATACCATCACC
AGCCGGAGACAGCAGCAGTGAGAAAGTCGAGGAGACTGGCCTTCGATGCA
GAGTGCGCAGAAGTTTAGAGAGCTGCTACTGAAGAGCACAGCTGACCCAT
CGAAGAAGCAGCGAACAGTGGATGGAGCCACACCCACTATCCAGCAGTTC
ACTTACTGGCGGGTTCATCTCTCGCAGAATCGCCACTCGATGAGGGAGTC
TCACGCGTGTGGTGGAGTT
FMO01308.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nerfin-1-RA | 3208 | CG13906-RA | 186..1255 | 8..1051 | 4685 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 909297..910222 | 8..930 | 4480 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:44 has no hits.
FMO01308.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:46:25 Download gff for
FMO01308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13906-RA | 150..1228 | 1..1051 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:55 Download gff for
FMO01308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nerfin-1-RA | 177..1255 | 1..1051 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:27 Download gff for
FMO01308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nerfin-1-RA | 177..1255 | 1..1051 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:27 Download gff for
FMO01308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 909288..910366 | 1..1051 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:55 Download gff for
FMO01308.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 909288..910366 | 1..1051 | 96 | == | Plus |
