FMO01320.5prime Sequence
1204 bp (930 high quality bases) assembled on 2008-03-18
> FMO01320.5prime
CAGTCGACATGATGGACGTAAGCAGCATGTACGGCAACCACCCGCACCAC
CACCATCCACATGCCAATGCCTACGACGGCTACAGCACCACCACCGCGTC
GGCGGCCAACGCCAGCAGCTACTTTGCTCCGCAGCAACACCAGCCCCACC
TGCAGCTGCAGCAGCAGCAACAGCATCAGCATTTGCAGCAGCCCCAGCAG
CACCTCACCTACAATGGCTACGAGAGCAGCTCCCCAGGCAACTACTATCC
GCAGCAGCAGGCGCAGCTGACACCACCGCCCACCAGCAGCCACCAGGTGG
TGCAGCAGCACCAGCAACAGCAGCAGGCGCAGCAGCAACAGCTCTATCCG
CATTCGCATCTCTTTAGTCCCAGTGCGGCGGAGTATGGCATCACCACGAG
TACGACCACGGGAAATCCGGGCACGCCGCTCCATCCTAGTAGCCACTCTC
CTGCGGACTCCTACTACGAAAGTGACTCGGTGCACTCGTACTACGCTACC
GCCGCAGTGGCCACAGTTGCTCCACCCAGCAATAGCTCACCTATTACCGC
CGCCAATGCAAGTGCCACCAGCAACACACAACAACAGCAGCAACAGGCAG
CAATCATCAGCTCCGAGAACGGGATGATGTACACCAACCTGGACTGCATG
TATCCCACGGCCCAGGCTCAGGCTCCGGTTCACGGATATGCCGGCCAGAT
CGAGGAGAAATACGCCGCCGTCCTGCACGCCAGCTATGCACCCGGAATGG
TGCTGGAGGATCAGGATCCAATGATGCAGCAGCCACGCAGTCGCAGATGT
GGCACCACCAGCAACATCTGGCAGGCAGCTATGCCCTAGATGCCATGGAC
TCGCTAGGAATGCACGCCCACATGCATCACGGCCTGCCCCACGGACACTG
GGCACTTGACCAACAATCCGCATCAGCACAGCCACAGTCAGCAGCACAGC
AGCAGCCGCACAGCAACCGCACATCCGAGAACAATCCCAGCGGCACACAG
CAGCACCACAGACTCGTGTCGTCAACGTGATGATCGCAGCAGCGCGGGGG
GATGATCCCCGGGTAGCTCAGTCCTCCTCACCCTCCGCCTCGAATGGAAC
ATTCTGCCGCCGCAGTCAGGTCCGCCAATCTCCGTACATTCCACTAATGG
ATGCCACTAGAGGATTCCCAAGGACCTACGGCTACCCGAAACATCATCCT
GCCA
FMO01320.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lab-RA | 2775 | CG1264-RA | 245..1372 | 9..1108 | 4835 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6677424..6678346 | 928..9 | 4435 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:35:49 has no hits.
FMO01320.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:46:43 Download gff for
FMO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1264-RA | 245..1380 | 9..1114 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:12 Download gff for
FMO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lab-RA | 245..1380 | 9..1114 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:40 Download gff for
FMO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lab-RA | 245..1380 | 9..1114 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:40 Download gff for
FMO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6677211..6678346 | 9..1114 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:12 Download gff for
FMO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2502933..2504068 | 9..1114 | 96 | | Minus |
