FMO01330.5prime Sequence
1201 bp (1010 high quality bases) assembled on 2008-03-18
> FMO01330.5prime
CAGTCGACATGGAACCGGTGCCCATCCGGCCAAAAGCGCCGGGAGCGAGC
AACCGCGGAGCCCTGCCGCTGGCGGCGAAGAAGCCGGCCAAGAAGCGTAC
GTACCACTGCGGCGTTTGTTTTGCGGAGTTCTCTCGTCATCTGGCCGCCA
AGCGGCACGAGCAGCAGTGCTCCGTCAGGGTGAGGCGTCTTTTCGTCTGC
CCCCACTGCCTGACGCTTTTCGGCGAGGAGGCCCGGCTGGAGCGGCATCG
GGAGCGAAAGCACAACGATGGCCAGTTCCTGTGCCTGCAGTGCGGCAAGA
AGTACGCGTCAGCCACGTTTCTTTACCGTCATGTTGCCAGTTGGCACGGC
CAGCAGTCGCTGTTCTACTGCGACATGTGCACGGACAACTGCAACGACGT
TAAGACCTTTAGCGGGATGCTGGAGCTGCAGGAGCACGCCGAGGAGGTGC
ATCGCCTGCGTACCCTGAAGTCCACGGCCAGTGATGCAGACAGCCAGGTT
GATGAAATGGAGGATCTTGAGATGCTAGAGGAGAACATTGAGAACATACT
GCCCAGCATCGACTGGGACGACGATCTCACCTTTGGCTGGCCCACCGACC
TGGACAAGGAGTCGTGCATTGTGAACGCTAAGCCGAGCGTTTTCGTGTGT
CCCTTCTGCGCCAACGGATTCCCCGGCAGTCTGAGCCTGGTGCGGCACCT
GGAGCAGGTTCACGAACGCAGTGCCCTGGACTGCTGCTACTGTGGCAAGA
GCCATGGCAGCCGAGAAGCCCTGCGGTCCCATCTGCAACGTGTTCACATC
CTCTTGCGCGGTCATGTGTGCGGTATTTGCCAGGCGGACTTCGCCACTGC
TGATCACCTAAAGAAGCACGTTAACAGTCTGCACCTGGACCACCGACCGC
ATCTGTGTCCCACGTGCGGAAGAGATTCACCCAGCGGTGCCACCTCACGA
TCACATAAAGACGGATCGCGGCATGGACACGGCACTTACACCTGTGATTC
TGCGTGCGGCCCTTCTCGGCATCGATCTCGACGGCATGGTGTGTGAGAAC
ATCGGCAGCTTTCTAGACATCGTTTGGCGCCGCGGGCCCAGGTAGGTGTC
TTATCCTAATCAATCTTATCTAATCCACACCTAGCTAGAATCTGCATGAC
ATGTGGCTGGAATCTCACATAAAAGCTCTGGCGGACACCGAGCGGCTCTC
G
FMO01330.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7101-RA | 1454 | CG7101-RA | 73..1126 | 9..1053 | 5020 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18831218..18831753 | 485..1016 | 2480 | 99.3 | Plus |
| X | 23542271 | X | 18830663..18831143 | 9..489 | 2405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:58:22 has no hits.
FMO01330.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:46:57 Download gff for
FMO01330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 58..1116 | 9..1058 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:02 Download gff for
FMO01330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1131 | 9..1058 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:25 Download gff for
FMO01330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1131 | 9..1058 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:25 Download gff for
FMO01330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18830663..18831143 | 9..489 | 100 | -> | Plus |
| X | 18831223..18831753 | 490..1016 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:02 Download gff for
FMO01330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18724696..18725176 | 9..489 | 100 | -> | Plus |
| arm_X | 18725256..18725786 | 490..1016 | 99 | == | Plus |
