FMO01331.5prime Sequence
1209 bp (1039 high quality bases) assembled on 2008-03-18
> FMO01331.5prime
CAGTCGACATGCACAGCGAAAAACACACGCCGGATATTCGGGAATTAATG
CCCGTTAGGGAGCACAGGTGCGAGAGATGTCCGAGTCTTGTCTTTGGCAA
CCTCAGTCACTATCAGCTGCACCTGCGACGGCGCCACCAGGAGGTTATCC
CACCCTCTGTGATCGGGCCAATTGTCGCATTCCATTGCCCCGTGGAAAAG
TGCATCTACCATGTGGCTACCAAGGGAGCCCGCAGCTTCACCAGCTTGCG
CTTGCTGCGACAGCACTACCAGAAGAGCCACCTGGACAAGAACTACAAGT
GCCTGGCGTGCGGCGGGAAATTCCTGCTGCAGCACCATCTGGAGAAGCAT
CAGTGCTCAAAACACAAGTGTCCAGTGTGTGAACTGACCTACAACAGCAA
GGCTGGCCTCAGGACCCACATGCGGCGCAAGAACCATTTGGTGCATCACG
AATCCGACAAGGTTCCCATACCCTCGCTGGCCACATGGAAAAGGCTGAAT
CCACAGCCAATTCCCGTTTCTGCAGATTCCTTAACCGCCCACAGTTTGAA
AACAGGCAGTGATTTACATCCGTCAGAGGAATATATTAACAACCTGCCTT
CCAACTTGGCGGGGGTTACTGAACTATATGCTGAAATACCCAATCCGGAG
GCCAATATGCCCTCCACTCTTGAACTGGATACCAATTTACCGGCTGCAGA
GGAACATATTCTTTGTTTCCTGCCCATTATGGATGTGTCCTATGCGCTAG
AGATGTCATCCCAGAAACTAGATATGGAAACACAAACGGAGGAGGACGAT
CTGAATGAAATCAGGAACGAAGTGCTGGCGCCCTTGTTACGCGATATAGA
AACCCAAACGCCCGACACCAGAGGCGACATAGGAACGATGACCGATGATT
TCCCAGAGGACAGGAGCCTGTTGCGGTCGGAGCCATTTCCACGCGTATTC
AGAAACTGAACCTATGTTTGACTTGCAAACTCTGCCCACATGTACACCCA
AACTGCGACGATTGTTGAGACTGGGGCTGTCCCACATCCAACCCAAACTC
ACTGCCAGATGTCTGTACAACACGCAGCACACGCAGACTGCGATGAATAT
GGACGAACTCTTCCGTACACTTCAGTGACTGCCCAACATGCCTGACCTAG
CTTCGGACTTCTGTTTGGCGCGCAGCGGGCGCTCAGAGTAGGTGTGCCTA
AATATCGTA
FMO01331.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 708..1832 | 4..1114 | 5270 | 98.7 | Plus |
| Asciz-RA | 1303 | CG14962-RA | 9..1133 | 4..1114 | 5270 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3163956..3165080 | 1114..4 | 4985 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:37 has no hits.
FMO01331.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:46:58 Download gff for
FMO01331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 706..1842 | 1..1122 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:24 Download gff for
FMO01331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 7..1143 | 1..1122 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:47 Download gff for
FMO01331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asciz-RA | 7..1143 | 1..1122 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:47 Download gff for
FMO01331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3163956..3165082 | 1..1114 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:24 Download gff for
FMO01331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3163956..3165082 | 1..1114 | 98 | | Minus |
