FMO01338.5prime Sequence
1268 bp (1050 high quality bases) assembled on 2008-03-18
> FMO01338.5prime
CAGTCGACATGCTCAAGTCCCTCAAGCCGGACACGTACGCCGGAATGGCG
AACGCCAAGTGCGGCGAGATCTACTTCCAGAGCCTGCACAGCTTCCGCAT
CGACTGTGCGTTCTGCGAGATGAAGAGCTTTGTGTTCGGAGACTTCCTGC
TCCACGTCCAGAACATTCACTTCGAGAACGGCCTGCTGAAGACGGAGGCA
ACGGACGCCGGTGCGAATCTCAAGCAGGAGCGGGATCGTGAGCGGGAGCC
TAACTCGCCGGTGCCCATTGTGGCGCAGGTGAATCCATTTGCCTGGTACG
AGATTGGTGGCGATCACAACGAGGACAGCGACGATGAGCGCGTTGTCCTG
GAAAAGCAGGATGAGGACGAAGATGAGCGGCCAGGCAGAAGCATAATCAA
GTGGCAGGACCATCAGTCGCTGACCAGCGAATCTCTACGTCAAGTCCGAG
CCCTCAAGGTGGACTACAAGGAGGAAGACTCCGAGCAGGAGGAGTGCGGC
ATGGAGCTGGATCTGGACAGCGAAGGCAGGCACTCTGCCAAGATTCCGCA
CTCGTGTCCGCACTGCACAAAAGTTTACCAGAGCCGCAAGGTCCTCGAAC
GCCACATAATGCGCCAGCACAAAGACACTCTCTCGCCGGATGTGGACAGC
GAGGACGCGGACTACGAGCCGCCCAAGGATGCGCCCGTCAAGTCCGCTGC
CCAGGAGTACAAGTGCGAGCACTGCGGCAAGATCTACCATGGCAAATACA
GTCTGCGTCAGCATTTAAAGCGGGATCATGACAACGGCGAGGAAGGAGGC
TCCGCCATCTTCACCTGCCTGGAATGCGAGGCCCAATTGCCGCGCCTGCG
CCTGCTGGACGAGCACATGGTGCAGCGCATGGCGGCGCTGCCTGTGTGGT
TTGCGGGCGGCGCTACAAGACGCGACACGAACTGAAACGCCACCAGCTCA
GCACACCAGCGAACGGAACGTGGCCCTGCCCGCATCCCGGCTGCGGCAGC
GCTTCTTCACATCCGTCATATGCGGCAATCACGGCAGGGTGCCACACGGG
AGCAAAGAACTTCGTCTGGCGAGAACTGTGCGGGCTACAGCCTGGCCGGA
ACAAAGAAGACGCCTGGCGCGTCTCCACATACAGGAGAGCCCACAACAGG
GGCGACGGGACCGGTTCGGGGGGTAATGGTGGGCACAAAAGAATTCCCTC
CATCGGCTGCGGAGAACATGCATGCATTCCAGGAAGACAACGCAAGTGTG
TGCACGATGTGCGTGTGT
FMO01338.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-RA | 2017 | CG2129-RA | 110..1228 | 8..1137 | 5125 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8145948..8147009 | 8..1068 | 4900 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:37:17 has no hits.
FMO01338.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:47:09 Download gff for
FMO01338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 5..1135 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:06 Download gff for
FMO01338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 103..1233 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:25 Download gff for
FMO01338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 103..1233 | 1..1145 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:25 Download gff for
FMO01338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8145941..8147071 | 1..1145 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:06 Download gff for
FMO01338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8039974..8041104 | 1..1145 | 97 | == | Plus |
