FMO01357.5prime Sequence
1209 bp (1013 high quality bases) assembled on 2008-03-18
> FMO01357.5prime
ATAAAACAAAGTTATCAGTCGACATGGAAGCCGACATAACGCCCCTGGCG
GAAACCAACGGAGAGCAGCGCCAAAATCCCCAGGAAAGTGCTCAAAACCA
AGAGCAACCGCAACCGCGGCAGGATTTGGCGGGCAAGTCGGTGGGTTCCG
CTGATGATGGCGTCTCCGGAACTGTGGGACAGATTATGGATTACCTCGAG
GACGATGCCGGTGCAACTGCCGACCAGGACGCGGAGATGGGCGAGGCAGA
GTATCTGGATGGCGAGATGCCGCAGGAGGATGAGAGCGAGACTCCGCAAA
CGGAGAAAGCCAATGAAGGTTGCCAGGAATCAAGCAATAAGAAGGATTTG
CAAGAATCTGCAGCTAAAGATGATTTTTCCAAGGAAAAAAGTGGAGAGGA
TGGTGAAAAAGACACCGACAAGGAGAAGAAGGCAACTCATTTACATGAAG
ATAACAACGATGATGCCGAAAAGGATGGCGACGAGGCCGACGCAGAGGAT
GAAGACGATGTAGAGAAGCCAGAAGATGAGGATGGCACCGAAGAAGGCGA
CGAGGCCATTGAAGAAGATGAGGACGCTCTCGATGAAGATGAGGATCCCA
ACGAAGAAGTCGAGGAAATTGAACCAGATTTCGAGACTGGCACCGATGCA
GAAGGTGAACTAATCACTGGCGATGAGCCGGGCGATCTGGCCGATGTGCC
CATTAGGGAGCGCAAGAAAGAGGAACCCGTGGACGAAGACCAGTGCCGCG
TTTGCACCAGCAAGGAAGAGCTAGTCTGCCTGTTTAAGAAGCAAATCGAT
GCCACGCCCGCGGACATGCTGCTGGTCATCTGTCCTAATGTCTCGATTTT
GCCCAAGGACTTTATGCCGCAATTCATATGCACCAAGTGCATGGGCAGCC
TTACCATTGCCATACAGCTGAAAAAGCAGCTGGAGACCACGGACCAGGAG
CTGCGCAAGCGTTTGTCCCGAAGCAAGAATAAAGTGCGAAGACCCCGCGG
CCATGTGTCATAGACGCCCCTGTCACCGATTCCAGTGAGGATGAGATGAC
TCGATGATGATCAGGTATCGATGTAGCCGACCCGAGTGCGACGCGATTCT
GCGATTCGATGACTGGAAGAAAAGAGCCGACCAGTGGCGTCTTCGAAAAG
CACTCAGAAGCCGGACGCAGTGGAACCCTTCCGGCCCTAAGAAGAATTCC
GTCCCTCTC
FMO01357.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12391-RA | 2378 | CG12391-RA | 292..1395 | 24..1113 | 5145 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11148666..11149513 | 1045..199 | 4145 | 99.5 | Minus |
| 2R | 25286936 | 2R | 11149600..11149777 | 201..24 | 890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:37:58 has no hits.
FMO01357.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:47:30 Download gff for
FMO01357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12391-RA | 280..1331 | 24..1069 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:20 Download gff for
FMO01357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12391-RA | 292..1343 | 24..1069 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:50 Download gff for
FMO01357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12391-RA | 292..1343 | 24..1069 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:50 Download gff for
FMO01357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11148666..11149511 | 201..1045 | 99 | <- | Minus |
| 2R | 11149601..11149777 | 24..200 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:20 Download gff for
FMO01357.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7036171..7037016 | 201..1045 | 99 | <- | Minus |
| arm_2R | 7037106..7037282 | 24..200 | 100 | | Minus |
