FMO01362.5prime Sequence
1243 bp (1056 high quality bases) assembled on 2008-03-18
> FMO01362.5prime
CAGTCGACATGGATTCCTCTCCTAGCTGTTTACTCTGCATGTGCGAGTAT
CCGGCCATGATGGGGGACTATATAGATGTACACTCCGCGCGCGGCGACCA
ATTGGAGGTGACTACGATCGTCAACCAGCACTTCCCCGTCCAGATCTCCA
AGGAAAGCGACGAAAGGATATGCGGCCGCTGCTGGAAAATCGTCTCAGAC
TTCCACACTTTACACGAGTTCGTCAGTGCAGCGCAGAGCTCTTTACAGGA
AACAAAAGTGGCGCTCATGGAGGATGATCCCCTAACACAGGAAACTACGT
CCTTTCCGGAGATTATAAAACTGGCTACTCAGGAGGAGGAAGGGGTGACG
GAACCACAGGAACTTGGCGGTCGGAACTTCTTTTACCCAGAGATTAAGAT
TGAGGAACATGAATTGGATACTCTTCCCCGCATCGAGATCCTAGAGAGAT
CGGCCAACACCCAGGAAAACCAGGACCAACTTGAGGGTGCAGCCAGACGC
CTTAGGAAGCGTTTGAAGGCAGAGGATGGATCAAGTGTTGACAAGGATAA
GGACGAGGATGGAGTAGAAGAGACTGCAGAACCTGCGCCGCCTAAAAAGC
GACGTGGTCGCCCAAGGAAATCAGACGCTGCCGTTGCCCCGCCCCAAAAA
CCTAAAGAAGACATTCAACTTGACCTTAAGGCAGAAGAGCTTGACGAGTT
CGTAGATGAGGAGACGGACCCTGACTTCTCATGCCTGGTGCCTAGCGATA
ACTCCTCCGAGGACGATGGAGGCAGCGATGGCTTCGACTCAGACTCAGAC
TTTGAACTGGACAATGGAAAGCAAGAGTTTGCCGTGCTGCCAAAAAGAAC
AGTAGTACGCCCCAAGAAATACAAGAAGCGGACGAACCGGCGGAGCCGAA
AGTCCGCATGTCCCGCGAACTGCTGGAGCAGCGCAAAAGCAGCAGGAAGA
ATACGACGTCATCATCGCCAGTTCTTTACCAGCGTGCTGCCGTGTGCCAT
CTGCATCTGCTGGTGCACAACTTCACCGAGATGCACGGTCATCACCGACT
GACCCATCAGTGGATCCCGGCTACTGATGTGCCTGCGGCCGCAGTCCCCA
GCGCAAGTGGCTGGCCGAGACATGTAATCGTCCACTGATTCTGATCACTT
TAAGGCACGCCTGGGAAGCCTATTTCCAAATTCCCGGCTCACTGGGAGTC
TGCACACCGAAGAGAGTCACCAGTGAGATACTCCGCGCGTGGT
FMO01362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4282-RA | 2393 | CG4282-RA | 147..1301 | 9..1154 | 5350 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16322434..16323501 | 12..1074 | 5060 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:19 has no hits.
FMO01362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:47:33 Download gff for
FMO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4282-RA | 136..1313 | 1..1166 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:28 Download gff for
FMO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4282-RA | 138..1315 | 1..1166 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:37 Download gff for
FMO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4282-RA | 138..1315 | 1..1166 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:37 Download gff for
FMO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16322431..16323599 | 9..1166 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:28 Download gff for
FMO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12209936..12211104 | 9..1166 | 97 | | Plus |
