FMO01369.5prime Sequence
1177 bp (1020 high quality bases) assembled on 2008-03-18
> FMO01369.5prime
CAGTCGACATGAGCCTGGAAGTGAGCAATATAAACGGGGGAAACGGTACT
CAATTGTCCCACGACAAGCGTGAGCTGCTGTGCCTGCTGAAACTCATCAA
AAAGTACCAGCTGAAGAGCACTGAGGAGCTGCTCTGCCAAGAGGCGAATG
TGAGCAGTGTGGAATTGTCGGAAATCAGCGAAAGTGATGTTCAGCAGGTG
CTGGGCGCAGTTTTGGGAGCTGGCGATGCCAACCGGGAGCGGAAACATGT
CCAATCTCCGGCGCAGGGTCATAAACAGTCCGCGGTGACGGAGGCCAATG
CTGCAGAGGAACTGGCCAAGTTCATCGACGACGACAGCTTTGATGCTCAG
CACTATGAGCAGGCATACAAGGAGCTGCGCACTTTCGTTGAGGACTCCCT
GGACATATACAAGCATGAGCTGTCCATGGTTCTGTACCCAATTCTGGTGC
AGATCTACTTCAAGATCCTCGCCAGTGGACTAAGGGAGAAGGCCAAAGAA
TTCATTGAGAAGTACAAATGCGATCTCGACGGCTACTACATAGAGGGTCT
TTTCAACCTTCTTTTGCTGTCTAAGCCCGAGGAGCTGCTGGAGAATGACC
TCGTAGTAGCCATGGAGCAGGATAAGTTTGTCATTCGCATGTCCAGGGAC
TCGCACTCTCTGTTCAAGCGACACATTCAGGATCGCCGGCAGGAAGTGGT
GGCAGATATTGTTTCCAAGTACTTGCATTTCGACACATACGAGGGCATGG
CGCGCAACAAGCTGCAGTGCGTCGCCACCGCGGGCTCGCACCTCGGAGAG
GCCAAGCGACAGGACAACAAAATGCGGGTGTACTACGGACTGCTCAAGGA
GGTGGACTTTCAGACTCTGACCACTCCAGCGCCGGCACAGAGGAGGAGAC
GATGATCCGGATGCCCGGATCGTCCGAAAGAAAGCCAAAAAGATCCCTGC
TGTCGAAAAGTCAGTCGATCGATGCTCATCATCGACAGATTCCCTGCGAC
TGAGATCGACAGTGCTAAGCTAGCCTCTCAGAGCAGCAGCGTTAGCCTCA
GCAAGATCACTGCCTTGCGTCTTCACGGTGCTTATTCATCAGGCGTAACT
GTGCGGAATCCACAATTCAAGTTGCCTGGGATTGCTAATCAGCGTGAGAT
TGGTACATGACCGCGAACTGCGTAGAC
FMO01369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf5-RA | 2362 | CG7704-RA | 69..1073 | 9..994 | 4590 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10878682..10879605 | 929..9 | 4470 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:28:36 has no hits.
FMO01369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:47:41 Download gff for
FMO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7704-RA | 58..1041 | 1..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:35 Download gff for
FMO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 61..1044 | 1..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:46 Download gff for
FMO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 61..1044 | 1..970 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:46 Download gff for
FMO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10878630..10879612 | 1..970 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:35 Download gff for
FMO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6766135..6767117 | 1..970 | 98 | | Minus |
