FMO01373.5prime Sequence
1218 bp (1027 high quality bases) assembled on 2008-03-18
> FMO01373.5prime
CAGTCGACATGGAGCTGCCTTCAATGGTGGAGCGTTCGGGTGATCGCTTG
GTGGTGCGCAGCTTGGTTAGTGGTGCTCCACTTTATCAGTCATCTATTGA
GGGCGGAGCAGGTGCTGTGCTTCCTATGTCCCAAAGCGTGCAGCCGCTAA
TAGGTCAGGACTTTTTGGAGCAACAACTGGAGCAGTATAAGGCGAATAAC
TTTATGTTTCCACTATCGATGGCCGGGTTTGTTTCCGCAGACTCTGCACC
ACCGGGGGACTTGGCCAAGGAAAATATGGAGAACTCACTGCCAGATGGTA
ATCCGTGCAACAACAACAACGACGATGAGCTGCCGCAGTGCAAGATACGG
CGTAACTACAGCTGCAACCAGTGCGCATTCTTCACGCAAAATCCGCGCAG
TCATCTCTCGCATCTGCGGGACGTACATGGCGAGCGGATTGTGATCAACG
AGTGCAAGTTGTGCCTCTATGCCTCACGCCACTTCCAGAAGCTGGTGCGG
CACATGAAAATGGTGCACGGCTGTTCCGATGATGGCGGCGCAGTGCAGGG
ATCAGGTGCTCAGCCGCGTGGTAAGCGAAATCTCTCCAGGGAGGTGCGCA
AGCGTCGTCTGGAGGAGAGCATTGAAGGCCAGGGTGCGACTGGGCAATGC
CTAGACCTCAGCGTGCTGCGCATGATCCAAAATGGACCGCCACTGGAGCA
GCTGAAAGTAGAACTGCAGCAGCAAGAGATGCAGCTACTGGCCAGTGTCC
AGGCGTACAATCGACAGCAGGAGATGCTGCAGCTGCAGCAGATCGTCGAG
AGCCACGACAACATATTCTCCATGGCCTACGAGTTCAGACCAAGTTAATG
CCGCCTAAGCAAGCAGAGTCCCTGAAATTGGAACAGCAAACAGCAGCTCC
GATTCCGAGGAGACTGCGAAGAGTCCTTCGCGGATACCGTGATTGTGTCG
GTAGAGCAGTTCATGCAGAGTGTCAATAGCACGCCCATCGAGCAGATCAA
AGCATGTGAGTACATTCATGCACTGATCAGGCAGCTCATGTGATTTCACC
ACCTACAAGTGGATCTAGACGGCCACCAGGACATGTGCATGCATTCAGTG
TCTGCGTGAACTAGAGATTCAACATGTGACTACGAATCAAACTATTGCAT
GCGTTCAATGACCGACGATGAGCTGAGATCGTGATCCAGTCATGTTCCAG
AACTAACGTTTTAATGCT
FMO01373.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5204-RA | 2364 | CG5204-RA | 73..1165 | 8..1070 | 4735 | 97.3 | Plus |
| CG9932-RE | 8986 | CG9932-RE | 1352..1545 | 330..523 | 445 | 82 | Plus |
| CG9932-RD | 7646 | CG9932-RD | 1352..1545 | 330..523 | 445 | 82 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13160805..13161730 | 8..931 | 4530 | 99.8 | Plus |
| 2L | 23513712 | 2L | 13030816..13031009 | 523..330 | 445 | 82 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:33:44 has no hits.
FMO01373.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:47:42 Download gff for
FMO01373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5204-RA | 68..1022 | 1..951 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:16 Download gff for
FMO01373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5204-RA | 68..1022 | 1..951 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:45 Download gff for
FMO01373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5204-RA | 68..1022 | 1..951 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:45 Download gff for
FMO01373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13160800..13161754 | 1..951 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:16 Download gff for
FMO01373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13160800..13161754 | 1..951 | 98 | == | Plus |
