FMO01389.5prime Sequence
1190 bp (1024 high quality bases) assembled on 2008-03-18
> FMO01389.5prime
CAGTCGACATGGTTCCACACCCCCTGGCCGCCCATCCCCACTTGCATGTC
CCGGTGGCAATGCATCCTCAAATGCAGCATCAGAAGGAGCAACAGCAGCA
GCAGCAGCAGTTGCAGCAGGAGCAGCAGCAACAGGATCAGCAGCAGTCAC
AGCAGGAGACACCTGCAACCATTGCTACCAATGGCAGCAATCAGGGATCC
TCGAATGTCCTTTCGGCGGCCAAAATAGCCGCTGTTGTTGCCGCCGCCAT
GGCCACCAGCAATGGCAATCCCACACCGACAGCAACAATCCCCGCCAGCA
GCAGCAGCAGCAGCAACACATTGCCGAGCAGCAATAACAGTAGTTGCCAC
AACAGCAGCAGCAGCAGCAATAGCTGCAACAGCAACCAAGTGCCAATACA
AGTGCCAATCCTGAGCGGATCCCCTGGGTCCACATCGTCAGCCAGTCACA
TTCCACATGTGCCCTTTGCCTACCATCACAATCTGCATGGCTATTTGGAG
AATCGACTGGAGGCGGTTGCCACACCAGCCCCCATGGACCTCTCTCTCGG
ATCCTCTGCCCGCCGTCAAATGCAGTTGCACGAAAAGGATCCATCTGGTG
TGGATCTCACTTTCCGCAAACGTAAGGTCATCACTAGTCCGATGCAGCCG
GATAAGATTAGTAAGCTGGAGGAGGTGATCAAGAAGGAGCCCGAAACGGA
AACGGAGAACGAGGATGTGGAGGTGGACGTGGAGACGGAGCAGCCGGAGG
AGCACAAGCTGCCCTCTAAACAGGTCAAGCTATTTAAGCCCTATTTGCTG
GACGATGATGAGGAGCAGGATCATCATCATCATCACCATCACCATCGGCA
GGAGGATTTGGATGAGGGAGCTGCCGAGGAGGAGCAGACGACGAGGAGAG
TCCCGCTATGCCGACGATGATGAGTGACTCCAGGAGCGCCGACAAGAAAC
AGCGTCGCTCAAGAAAAAGCCATCGGCAATCACGAACAAAGGGAACCCAT
CATCTGAGCACATCCGTATCCCGTGCTGTGTATCGCCGCAGTCGATCACC
AGCAGCTTCATGCCACAGTATGCACAGCAGCAGACTTCGTTCCCGGCGGA
TCTTAATCAGCATTCAGACACTGTGCATTCAGAGGCCACAGGCCCCTAGC
CATTCCGGGACGCCTTTGGCAACGTTCTGTTGTTCCTAGG
FMO01389.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| brk-RA | 3194 | CG9653-RA | 1140..2240 | 8..1085 | 4960 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7309078..7310085 | 8..1006 | 4630 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:00 has no hits.
FMO01389.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:24:47 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:43 Download gff for
FMO01389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brk-RA | 1134..2251 | 1..1098 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:22 Download gff for
FMO01389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brk-RA | 1134..2251 | 1..1098 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:22 Download gff for
FMO01389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7309072..7310169 | 1..1077 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:43 Download gff for
FMO01389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7203105..7204202 | 1..1077 | 97 | -> | Plus |
