FMO01390.5prime Sequence
1169 bp (994 high quality bases) assembled on 2008-03-18
> FMO01390.5prime
CAGTCGACATGAATTGCTGCATTTGTCAATTCTCGGTACGCGTACCGAAG
GACATTCACACCGATACCGTCGGACATCCGCCGGTGCTGATCAGCGAACT
GGTACTGCAGTGCACCCGGGGCACGAATTACGTCCTCACGGAGGAATCGT
CGACGATCTGCAAGAAGTGCTGCGAGAAGCTCGCCAGATACCACAAGTCC
ATACAAATAGCGCGCAAGCTGCGAGGGGAGATCCTGGAACTGATCCACAG
TCCCTACATGTCCAAGGACCACAAGCAGACCTCCTACAAAGAGGACGATC
TCGACCGAGAGACCACCATAAGCAAATTCGATGGGAATATTGAGGAGGCA
CAGCAACAGGACGAGGAGGAGCAGGAACTGGAGAGCGTGGGCACCACCGT
CACCCTGGTCGGTCCCGCCGGCATCGTGGAGGAAGTGGCCGAAGAGGAGC
ACACCTTCATTATCAAACAATCAGAGGAGGAGGATGAGTTCCACTCCGTA
GACTTAGAGCTAGATATCGACAACGAGATTATCATTAACGAAGAGGAAGC
CCACGAGGTAGAGGAGGTGGCCCACGAGATAGAGGAGGTGGCCCACGAGA
TAGAGGAGGAGGATCTGTTGCCACATGACAAGCAAGAGGCCCAGGAGGAA
GACTTTTTTAAGGAAGATACCATGAGTGACTTTGACGAACATCTGGACGG
CGCAATAGAGTACATAATATCCGATGGCGAGGACCAGGAGCAGGACAACG
AAAGCTCCGGCGAATACACGGTCAACATACAATGCCCCAGCTGCCCGGAG
AGTTCAGCAGCCGGCGCGCTTACATGTCCACACGAAACGCGAGCACTTTC
CCGGCTACGTCTGTGATCAGTGCGGCAGACGCTGCAATCGTACTTCGGGT
TCATAGGGCACCTGCAGAACCACGAGCCCGTGAAGCAGTCGCCTGCCCAG
TGTGCCGGACGCTTTAGCCGCAAGTCGGCTGAGCACCACATGCCTGCACT
CGCAACGCATACCAGTGGATGTCTGCTCAAGCGATCGTCACAGTGCCTGT
ACAGCAAGATGATCAGACGCGAGACACGGCTGAATGCAGGTGTGCGCTCA
ACCCGACAGTCCATGACGCATGCATCCACGGCAAGGCCCTGCCCGTCCCG
GTGGTGCTACACAGAGCGC
FMO01390.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7928-RA | 1631 | CG7928-RA | 70..1114 | 9..1035 | 4790 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30035829..30036801 | 975..9 | 4570 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:47:27 has no hits.
FMO01390.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:46:05 Download gff for
FMO01390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7928-RA | 37..1049 | 1..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:14 Download gff for
FMO01390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7928-RA | 61..1073 | 1..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:56 Download gff for
FMO01390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7928-RA | 61..1073 | 1..1001 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:56 Download gff for
FMO01390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30035798..30036810 | 1..1001 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:14 Download gff for
FMO01390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25861520..25862532 | 1..1001 | 98 | | Minus |
