FMO01391.5prime Sequence
1221 bp (1024 high quality bases) assembled on 2008-03-18
> FMO01391.5prime
CAGTCGACATGGCCCTGGAGGATCGCTGCAGTCCACAGTCAGCGCCCAGC
CCCATTACCCTACAAATGCAGCATCTTCACCACCAGCAACAGCAGCAGCA
GCAACAGCAGCAGCAAATGCAGCACCTCCACCAGCTGCAGCAACTGCAGC
AGTTGCACCAACAGCAACTGGCCGCCGGTGTCTTCCACCATCCGGCAATG
GCCTTCGATGCCGCTGCAGCCGCCGCTGCTGCAGCTGCTGCTGCGGCCGC
CCACGCTCATGCTGCTGCACTGCAGCAGCGCCTCAGTGGCAGTGGATCGC
CCGCATCCTGCTCCACGCCCGCCTCGTCCACGCCGCTGACCATCAAGGAG
GAGGAAAGCGACTCCGTGATCGGTGACATGAGTTTCCACAATCAGACGCA
CACCACCAACGAGGAGGAGGAGGCGGAGGAGGATGACGACATTGATGTGG
ATGTGGATGATACGTCGGCGGGCGGACGCCTGCCACCACCCGCCCACCAG
CAGCAGTCGACGGCCAAGCCCTCGCTGGCCTTTTCCATCTCCAACATCCT
GAGCGATCGTTTCGGAGATGTCCAGAAGCCGGGCAAGTCGATGGAGAACC
AGGCCAGCATATTCCGCCCCTTCGAGGCGAGTCGTTCCCAGACTGCCACG
CCCTCCGCCTTTACAAGAGTGGATCTGCTGGAGTTTAGCCGGCAACAGCA
GGCTGCCGCCGCAGCCGCTACTGCGGCCATGATGCTGGAACGGGCCAACT
TCCTTAACTGCTTCAATCCGGCTGCCTATCCCAGGATACACGAGGAAATC
GTGCAGAGTCGGCTGCGCAGGAGTGCAGCCAATGCCGTCATCCCGCCGCC
CATGAGCTCCAAGATGAGCGATGCCAATCAAGAGAAATCTGCTCTGGGAT
CCCTGTGCAAGGCGGTCTCGCAGATCGGACACCTGCTGCTCCTACGGATG
ACCCAACCTCCGCTGAGTAGCAGTGCAGCAGCTTGCCAGTCCGCCACCCG
CCTCCATGCCTCGACATAACAGCACTTCTCCGTGGCCACAGCTCGAGCTC
TCCTCGTCGGTGCTCCTCGGCGGCCAGTCATGACCTCCTTCGCCAGAACC
GAATGGGAGCCATGATCGGAGTCAATGCACGATTCCCAGGCGGACCAATC
CGCCGCCATCTCGCCGTTAGCGAATCCCGAAAGGGAGCCTCTGCGAAGTA
ACGCAGCTTTCGACGAGACGA
FMO01391.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| en-RA | 2465 | CG9015-RA | 214..1395 | 9..1171 | 5125 | 96.8 | Plus |
| en-RB | 2792 | CG9015-RB | 541..1722 | 9..1171 | 5125 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11526591..11527670 | 1078..9 | 4800 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:52:31 has no hits.
FMO01391.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:46:07 Download gff for
FMO01391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9015-RA | 214..1359 | 9..1137 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:10 Download gff for
FMO01391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| en-RB | 541..1686 | 9..1137 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:34 Download gff for
FMO01391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| en-RB | 541..1686 | 9..1137 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:34 Download gff for
FMO01391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11526591..11527670 | 9..1078 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:10 Download gff for
FMO01391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7414096..7415175 | 9..1078 | 98 | | Minus |
