FMO01406.5prime Sequence
740 bp (740 high quality bases) assembled on 2008-03-18
> FMO01406.5prime
CAGTCGACATGGGCAATAAACAGATAAAACAACAACTGGAGACGGCCCAG
AAGACGGGAATCCTGAAGATATCCTTGCAGCGGCTGCAAGAATTCCCACT
GCAGCTAAGGGCCTACCCGAATGTCCTGAAAACCCTGGATCTCTCCGAGA
ATCGCTTCGAACGTGTGCCCGACGAACTGGGCAAGCTGACGCTACTCAAG
CACCTCAATCTAAGCGGAAATCGACTGGTGGAACTCAACGAGGTGGTGGG
CGAACTGGCCAAGCTGGAGGTGCTGTTGCTGATGGACAATATGCTGACAA
GGCTGCCCAAAACCCTGGCCAATTGCACGCACCTGAAGACCGTGAATCTG
AGCAACAATCAGCTGAAGGAGTTCCCCTCCATGCTGTGCGGTCTGAAGCA
GCTGGATGTCCTGGACCTGTCCAGGAACAAGATCACCGATGTGCCCGCCG
ATGTGGGCGGACTGTTTGTGACCGAACTGAACCTTAACCAGAACCAAATA
TCCTCGCTGGCGGAGGAAGTAGCCGATTGTCCCAAGCTGAAGACACTGCG
GCTCGAGGAGAACTGCCTTCAGGCAGCGGCCTTTACACCCAAGATCCTCA
AGGACTCGAAAATCTGCAACCTGGCCGTCGACGGCAATCTGTTCAACTCG
AAACAGTTCACCGATCTCGATGGCTACGATGTCTACATGGAGCGGTATAC
GGCGGTCAGGAAGAAGATGTTCGCAAGCTTTCTAGACCAT
FMO01406.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3040-RA | 1070 | CG3040-RA | 219..932 | 9..722 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6972462..6973175 | 722..9 | 3570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:52:53 has no hits.
FMO01406.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:11 Download gff for
FMO01406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 228..949 | 1..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:20 Download gff for
FMO01406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 228..949 | 1..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:42 Download gff for
FMO01406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 211..932 | 1..722 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:42 Download gff for
FMO01406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6972462..6973183 | 1..722 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:20 Download gff for
FMO01406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6866495..6867216 | 1..722 | 99 | | Minus |
