FMO01409.5prime Sequence
575 bp (575 high quality bases) assembled on 2008-03-18
> FMO01409.5prime
CAGTCGACATGAAGTCCGAGAAACTGAAACGAAACTTTTGGGTCTCCGCC
GAAATAGAGTGCATGCTCGACCTGATTAAGGAGGTGAACAACTGCCAGGG
AGCCCTGTCCACCAGCACCACCCAGTACACCTTCATCCAAATCGCCAATC
AGATGAAAAAAAGGGGTTTTCCAAACAAGTCGCCCACCCAAATACGCAGA
AAATGGTTTCAAATGAAGAGCGCCTATCTGTGTTACAAAAAGGGAAATGT
TGATCGACTATTTCTGATACCCGAGAAATTCCGCAACGCCATCGCTGAGT
TCGTAGAAAGTGGCGAGAAAATCGGACGTTCCAATCTATCCACCATTTCA
AGTGGAACCCCAGCTATCGTGCAGCAAAATCAGGAAGTACACTCAGAGGA
AGACACTTCGCCCATGGATATATTCCTGAATCAGATCCGTAAAAACAATA
AAATGATTAATTCGGAGTTCTTTAGGATGGAAGAATCGTTACAGCAATTC
GAACAGAAATGCCAGTTTATTAGAGACAAAAACATAGCCAAGCTCATCGA
TGGTTATGCAAGCTTTCTAGACCAT
FMO01409.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5727-RA | 772 | CG5727-RA | 78..627 | 8..557 | 2750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10210225..10210604 | 387..8 | 1900 | 100 | Minus |
2L | 23513712 | 2L | 10209998..10210169 | 557..386 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:28:47 has no hits.
FMO01409.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:15 Download gff for
FMO01409.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5727-RA | 60..619 | 1..563 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:40 Download gff for
FMO01409.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5727-RA | 72..631 | 1..563 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:54 Download gff for
FMO01409.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5727-RA | 72..631 | 1..563 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:54 Download gff for
FMO01409.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10209994..10210167 | 388..563 | 98 | <- | Minus |
2L | 10210225..10210608 | 1..387 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:40 Download gff for
FMO01409.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10209994..10210167 | 388..563 | 98 | <- | Minus |
arm_2L | 10210225..10210608 | 1..387 | 98 | | Minus |