FMO01411.5prime Sequence
428 bp (428 high quality bases) assembled on 2008-03-18
> FMO01411.5prime
CAGTCGACATGTATCAGCCATCACTGAAAGTCCAGCCCGCCGAGGTGTCC
GTGCTGAACGCCACCGGCCGTGTGGGAATGCCCACCGAGGCCAACTGCCT
GAACCAACTGGCCCACGTCCACCGGCTGCGCGACTCGGAGCTGAACTACA
ACGAGCACCAGTACAACCGCAACATGCAGATGCTGCGCAACCACGAGGGC
CTCGGCGTGCCCCTCAAGATGGGCATGGAGCGCTTCGCCGCACGTCAGGT
GGGCCGCCTGCCCTTCCTTTCGTCCAGCAACTTCATGGACGATGTCCTGA
CTGGCCGCTGTGATTCCATTGGCTTCGAGGACTTCATGAACTTGCCCGAG
AACAGCGAGCATATGCGTCAGCCCCACGCTGTGGTGGAGAAATCTCTGGG
AATTTACCAAGCAAGCTTTCTAGACCAT
FMO01411.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pomp-RA | 1092 | CG9324-RA | 128..529 | 9..410 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20787849..20788115 | 11..277 | 1335 | 100 | Plus |
| 2L | 23513712 | 2L | 20788400..20788535 | 275..410 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:58 has no hits.
FMO01411.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:00 Download gff for
FMO01411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9324-RA | 135..545 | 9..421 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:54 Download gff for
FMO01411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pomp-RA | 128..538 | 9..421 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:22 Download gff for
FMO01411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pomp-RA | 128..538 | 9..421 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:22 Download gff for
FMO01411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20787842..20788115 | 1..277 | 98 | -> | Plus |
| 2L | 20788403..20788544 | 278..421 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:54 Download gff for
FMO01411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20787842..20788115 | 1..277 | 98 | -> | Plus |
| arm_2L | 20788403..20788544 | 278..421 | 96 | | Plus |
