FMO01413.5prime Sequence
506 bp (454 high quality bases) assembled on 2008-03-18
> FMO01413.5prime
CAATCGACATGCTGAAGATCGCCGCCGAGGGAATCGCGCCACGTCTGGCG
GCGGCCTGTTGCTCCATTGGAGCGAAGAGCAAAGGCCAAAGAATGGCGCC
CCATGCGGCCAGGGGCACCCAGAAGTACCTGTCGCAGTCGCAGCACCTCC
ACAAAATGCTGGTCATCAAAGACCACTACGAGTTCGATCAGAAGGTGATC
AACAGCGACAACCCGGTGATCGTGAACTTCCACGCCGAGTGGTGCGACCC
CTGTAAAATACTCACGCCCAAGATGCTCGAGCTGCTTGAAAACTCGAACG
AGATCGACCTGGCGGTCATCAATGTGGAGACGAACCTGGATCTCGTCGAG
ACCTTCAAGGTGAAGGCCGTGCCCGCTGTTCTGGCCTTCAGGAACGGCAT
CGTAATGGACAAGTTCATTGGTCTGGTCGACGCCAACAGCATCGAGACCC
TAATCGACAAACTGAAGCGGAAGCAACAGCAGAAGCAAGCAAGCTTTCTA
GACCAT
FMO01413.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3719-RA | 831 | CG3719-RA | 158..636 | 9..487 | 2275 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1379080..1379374 | 487..193 | 1385 | 98 | Minus |
| X | 23542271 | X | 1380134..1380323 | 198..9 | 920 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:53:02 has no hits.
FMO01413.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:22 Download gff for
FMO01413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3719-RA | 145..632 | 1..487 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:26 Download gff for
FMO01413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3719-RA | 149..636 | 1..487 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:47 Download gff for
FMO01413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3719-RA | 149..636 | 1..487 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:47 Download gff for
FMO01413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1379080..1379372 | 195..487 | 97 | <- | Minus |
| X | 1380138..1380332 | 1..194 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:26 Download gff for
FMO01413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1273113..1273405 | 195..487 | 97 | <- | Minus |
| arm_X | 1274171..1274365 | 1..194 | 97 | | Minus |
