FMO01416.5prime Sequence
677 bp (677 high quality bases) assembled on 2008-03-18
> FMO01416.5prime
CAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAGTGAACGAC
TGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTCAACGAGGA
GGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGATGCTTATCC
TGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCTACGCGATG
AACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGCAACGGCAA
CTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAATGCGTCTGA
GGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGAATGCTGAT
GTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAACAATACGG
GTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCTAAATGAAG
TCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCAGCTCGAAC
AACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAGTTCTTCAA
CACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAGCACCTCGT
CACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGATCGCCGGTT
CCCGCAAACGCAAGCTTTCTAGACCAT
FMO01416.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15735-RA | 1251 | CG15735-RA | 542..1192 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12019181..12019325 | 9..153 | 725 | 100 | Plus |
| X | 23542271 | X | 12019628..12019760 | 154..286 | 665 | 100 | Plus |
| X | 23542271 | X | 12020006..12020138 | 401..533 | 665 | 100 | Plus |
| X | 23542271 | X | 12020535..12020660 | 534..659 | 630 | 100 | Plus |
| X | 23542271 | X | 12019821..12019941 | 281..401 | 605 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:11:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 617..557 | 113 | 67.2 | Minus |
FMO01416.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:28 Download gff for
FMO01416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15735-RA | 538..1191 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:33 Download gff for
FMO01416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15735-RA | 542..1195 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:01 Download gff for
FMO01416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15735-RA | 542..1195 | 9..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:01 Download gff for
FMO01416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12019181..12019325 | 9..153 | 100 | -> | Plus |
| X | 12019628..12019758 | 154..284 | 100 | -> | Plus |
| X | 12019825..12019941 | 285..401 | 100 | -> | Plus |
| X | 12020007..12020138 | 402..533 | 100 | -> | Plus |
| X | 12020535..12020663 | 534..663 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:33 Download gff for
FMO01416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11913661..11913791 | 154..284 | 100 | -> | Plus |
| arm_X | 11913858..11913974 | 285..401 | 100 | -> | Plus |
| arm_X | 11913214..11913358 | 9..153 | 100 | -> | Plus |
| arm_X | 11914040..11914171 | 402..533 | 100 | -> | Plus |
| arm_X | 11914568..11914696 | 534..663 | 98 | | Plus |
