FMO01422.5prime Sequence
689 bp (689 high quality bases) assembled on 2008-03-18
> FMO01422.5prime
CAGTCGACATGCCCGTCCAAGCCAAGATCGGTCCCAGCATTCTCAATGCG
GATCTCTCCAACCTAGCGGCGGAGTCACAGAAACTACTGGACAATGGAGC
GGACTACCTGCATCTGGACGTGATGGACGGCACTTTTGTGCCGAATCTCA
CCTTTGGTCACCCCATGGTCAAGAGCTTGCGCAACAAGATCAAGACGGCC
TTTTTCGAGACGCACATGATGGTCCAGAATCCGGAGCAGTGGATAGAGCC
CATGGCCGATGCCGGTGTCAATCTCTACACCTTCCACGTCGAACCGGTGC
AGGATGTCGTCAGAGTCAGTCGCCGAGTGCAGGAGTCGGGCATGAAGGTG
GGCCTGGCCATTAAGCCGGGCACCGAGGTACAAGATCTGGAGAAGTACTT
GAGCATTGCCGACGTTGTGCTGGTGATGACCGTGGAACCCGGTTTTGGCG
GACAATCCTTCATGGCCGATATGATGCCGAAGGTCAAGTGGCTGCGCGAA
AACTACCCCAACCTGGACATCGAGGTGGACGGAGGTGTGGGACCCAAGAC
TATACACTGCTGTGCCGAGGCCGGAGCCAACATGATCGTCTCGGGAACCG
CCGTGGTGGGCGCCTCCGATCAGTCGCAGGTCATCAAGGAGTTGCGCGAT
GTGGTGCACAGCTACCTCAAAGCAAGCTTTCTAGACCAT
FMO01422.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30499-RB | 891 | CG30499-RB | 99..761 | 9..671 | 3315 | 100 | Plus |
| CG30499-RA | 1060 | CG30499-RA | 268..930 | 9..671 | 3315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7564564..7564859 | 671..376 | 1480 | 100 | Minus |
| 2R | 25286936 | 2R | 7565055..7565242 | 380..193 | 940 | 100 | Minus |
| 2R | 25286936 | 2R | 7565299..7565484 | 194..9 | 930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:47:57 has no hits.
FMO01422.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:16 Download gff for
FMO01422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30499-RA | 261..936 | 2..679 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:03 Download gff for
FMO01422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30499-RA | 263..938 | 2..679 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:35 Download gff for
FMO01422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30499-RA | 263..938 | 2..679 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:35 Download gff for
FMO01422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7565058..7565240 | 195..377 | 100 | <- | Minus |
| 2R | 7565299..7565489 | 2..194 | 97 | | Minus |
| 2R | 7564556..7564857 | 378..679 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:03 Download gff for
FMO01422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3452563..3452745 | 195..377 | 100 | <- | Minus |
| arm_2R | 3452804..3452994 | 2..194 | 97 | | Minus |
| arm_2R | 3452061..3452362 | 378..679 | 98 | <- | Minus |
