FMO01424.5prime Sequence
698 bp (698 high quality bases) assembled on 2008-03-18
> FMO01424.5prime
CAGTCGACATGGAGAGCAACTTGAACAGGATCATTCGTGAATCGGCCAAA
CTGAAACTCTGCGGTCAGCTCAGCAAATACACCAATGTGATGAAGGGATG
GCAGTACCGTTGGTTTACGGTGGACGCCAAGACAGGATCGCTGAGCTACT
ACCTGTGCGACTCGTCGACGGTGGGCGACGACATCGCGCCCTCGCCCCAC
GTCCTGGCCAGTGCTCCCAGGGGCCAGGTGCAGCTGGCCGGCGCAGTGGT
GTACCCGAGTGACGAGGACTCTAGGACGTTCGCCATCGCCTGCGCCTCCG
GCGATACGGTAAAGCTGAGGGCCAACGATGCCAGGGCCCGTCAGGAGTGG
GTGGATGGCCTGCGGGCGGTGGTCGAGAGTCACATGAAGGCGATGGACAT
CAGCAACTCGTCGCCGCTTCCTCCGCGGGAATTGCTTGCCGCCTCCGATG
CCATGGTTTCAGCGCGCCAAGCTCTGTTTCTCACGGAACAATGCAACGCT
TCTCTGGCCAGGGCCATCGAGAGCATCGACTGCGCTTCCTTCTCGCCAAC
GGATCCCGATCTTCTTTTGCTCAAGGCGATCTCCACGGCCAGCACCCAGT
GCCTGCACCAGTGCTTGGGATTACTGCAACGCCACCAGGAGATCAACCAG
CCGGTGGCAGAGGCCGTGCCTCTTGTGCTTGCAAGCTTTCTAGACCAT
FMO01424.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9205-RB | 941 | CG9205-RB | 190..861 | 9..680 | 3360 | 100 | Plus |
| CG9205-RA | 1105 | CG9205-RA | 354..1025 | 9..680 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1035559..1035956 | 96..493 | 1990 | 100 | Plus |
| 3L | 28110227 | 3L | 1036031..1036218 | 493..680 | 940 | 100 | Plus |
| 3L | 28110227 | 3L | 1035374..1035462 | 9..97 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:39:21 has no hits.
FMO01424.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:20 Download gff for
FMO01424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9205-RB | 177..856 | 1..680 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:31 Download gff for
FMO01424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9205-RA | 346..1025 | 1..680 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:03 Download gff for
FMO01424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9205-RA | 346..1025 | 1..680 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:03 Download gff for
FMO01424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1036032..1036212 | 494..674 | 100 | -> | Plus |
| 3L | 1035366..1035461 | 1..96 | 95 | -> | Plus |
| 3L | 1035560..1035956 | 97..493 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:31 Download gff for
FMO01424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1035366..1035461 | 1..96 | 95 | -> | Plus |
| arm_3L | 1035560..1035956 | 97..493 | 100 | -> | Plus |
| arm_3L | 1036032..1036212 | 494..674 | 100 | -> | Plus |
