FMO01425.5prime Sequence
698 bp (698 high quality bases) assembled on 2008-03-18
> FMO01425.5prime
CAGTCGACATGTACGACCGACTGATGGCCCAATTCGCCCAGTGCAAGCTC
ACTGCGTTAAAGAATGTACAAACTCTGCAGATGATCGCCGGTGAGCGTGA
CAACTACACACAACTAGTTGAACACCACGAAGAAAGTATTGTTTTGGCTA
AAGCGGAAATCGAATCCAGTAAAAAAGAGCTAATCACTGCCAAGCAGATT
CGCAAGAACAAGATGGAGTACGACCTGCTGGCCTCGCTCATCCAGGACCA
ACCGGACCGCAGTGAAACACAGCGACATATTGAGACCATTAGGAGGGAGA
TTGACGACTTGGTGCAAAAGAAGCTAAAGATGGAGCGCAAGTTTCAGAAA
CGACGCAATGACTTCACTTTGCTGATGTACACGATTCACGAGCTGGAACA
GCAGCTGGACCAGGACAGCTCATCCTCGGCATCCTCCTCGTCCAGCGATT
GCGATGCCCGCTCTGAGCCGGACCTAGACGACAATGGGATCATGGAGGTA
AGCGATGAAGACGACGATCTCAACAATAGCACTCCCACAAAGTTCGACGG
AGCCCGCGGCGAGCCCAAATATCACTCAGTCTCTACTGAGGACTCTAAAG
CCATGTCCGTAGAAGAGGACACGGTGCTTGAGCTAAGCATCGACAAAGAT
GAGCACGACGTGGATGTAGCTGTTGCCAATGCAAGCTTTCTAGACCAT
FMO01425.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thoc7-RB | 926 | CG17143-RB | 189..861 | 8..680 | 3365 | 100 | Plus |
| thoc7-RA | 929 | CG17143-RA | 192..864 | 8..680 | 3365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 211701..212373 | 680..8 | 3365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:36:21 has no hits.
FMO01425.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:43 Download gff for
FMO01425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17143-RB | 180..867 | 1..688 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:31 Download gff for
FMO01425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 183..870 | 1..688 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:54 Download gff for
FMO01425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 183..870 | 1..688 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:54 Download gff for
FMO01425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 211695..212382 | 1..688 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:31 Download gff for
FMO01425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 211695..212382 | 1..688 | 98 | | Minus |
