FMO01426.5prime Sequence
512 bp (512 high quality bases) assembled on 2008-03-18
> FMO01426.5prime
CAATCGACATGTCGCCGGCTGACGATAATTCCTTTGCCACAACTCATGGA
AACAAAAAGGCCACCTACACGGTGATATGCATCAAGATTGTGGAACTGTG
CCTGCTTATATGCTGTTTGGGTCTGATCGACGAGCCGGCCACCAATTCTC
ATCTGCGGGTGTTCATCACTCCCCGAGTGGCTTCCCTTTGCTATGTGACC
TTTGGAGCACTGACCATCTACACGGCAATCTATCTGATAATGGCGCTCTT
CGGTGATTTGACTCCATGGCGTACGGCTACTTTGTGGAATCTAGTGGCCT
TTGTGCTCTTCGTGGCCGAAACCGCCCTGCTTTTCCGGGATTGGTCCACC
ACCAAGGATCGCAACTACTGGCACCCGAATATGCATCGTTTGGATCTCGT
GATGGCTTCCGCCTCGATTGCCTTGGTTACCTCGCTGGTCTTCTTGCTGG
ACATACTCATCACCCTGCGTTTAGGTGTCCACGGAGATCTAGAAGCAAGC
TTTCTAGACCAT
FMO01426.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9628-RC | 890 | CG9628-RC | 207..697 | 4..494 | 2410 | 99.4 | Plus |
| CG9628-RB | 1053 | CG9628-RB | 179..669 | 4..494 | 2410 | 99.4 | Plus |
| CG9628-RA | 1125 | CG9628-RA | 251..741 | 4..494 | 2410 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14627556..14627790 | 260..494 | 1145 | 99.1 | Plus |
| 3L | 28110227 | 3L | 14627334..14627496 | 98..260 | 815 | 100 | Plus |
| 3L | 28110227 | 3L | 14627032..14627126 | 4..98 | 460 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:11 has no hits.
FMO01426.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:45 Download gff for
FMO01426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9628-RB | 165..657 | 1..494 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:49 Download gff for
FMO01426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9628-RA | 249..741 | 1..494 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:07 Download gff for
FMO01426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9628-RA | 249..741 | 1..494 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:07 Download gff for
FMO01426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14627030..14627126 | 1..98 | 96 | -> | Plus |
| 3L | 14627335..14627495 | 99..259 | 100 | -> | Plus |
| 3L | 14627556..14627790 | 260..494 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:49 Download gff for
FMO01426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14620130..14620226 | 1..98 | 96 | -> | Plus |
| arm_3L | 14620435..14620595 | 99..259 | 100 | -> | Plus |
| arm_3L | 14620656..14620890 | 260..494 | 99 | | Plus |
