FMO01430.5prime Sequence
1017 bp (369 high quality bases) assembled on 2008-03-18
> FMO01430.5prime
CAATCGACATGTCTCGTGCGACCAGGGCTTTTAAAGTGCTGATTTCCCAT
CCAAATGTCCCATCACCGGCTCTGGAACTGCTCCGATCCCGTGGAGCGGA
GACCATCATCTGCCAGAGTGTGCCGCCCTCGAGGGATGAGATCCTGCAAA
AGGTGCCCGGCGTGGATGCCATCTATTGGGCCCATTACCATCCCCTGAAT
GCCGGAATCCTGGATGCTGCTGGATCCCAGCTGCGTTGCGTGAGCACCAT
GTCCTCCGGAATCGATTTTGTGGATATTCCGGAGTTCCAGAAGAGGGGAA
TCCCATTGGGCCACACTCCCGGGGTGGTGAAAAATGCAGTGGCCGATCTC
GCCATTGGCTTGATGATTGCAGCCGGTCGTCACTTTCATGCCGGTCGCAC
CGAAATCGAGAGGTCCCAATGGAAAATCGAGCACATCAACTGGATGATGG
GTCAAGAGATTCGCGATTCCGTCATCGGTTTCTTTGGCTTTGGCGGTATT
AATCAGGCCATCGCCAAGCGATTGCAATGCTGGGATGTGGCCAAGATCAT
CTACCATACTCGCACCCGAAAGGAAAACGATGGCGACTTCAAGGCAGAGC
ATGTGTCGTTTGAACAACTTTTAAAGAAAGTGACTTCCTGGTGGTAGCTG
CTCCACTTACAAACGAAACTATAGAGAAATTCAATGGAGAGGCATTTAAT
CTGATGAAGAGGAGTTCTGTGTTTGTCAATGTGGCCAGAAGAGGTCTGGT
AAATCAAACTGACCTTCATGACGCCCTGACAAATGGTACAATTTCTGCCG
CAGGCTTGGATGTGACCACACCATAATCACTGCTCGCCAATAGTCCTCTT
CTCATGTGCCCAATTGTGTTATCCTTCCTCATATGGGCACTCAGACGATG
AACACTACCATTGAAATGGGATGCTTGCTGCCATATATTTTGACGCATCG
AAAGCAGCCATGATGAGCCAGCTACGCAAGCTTTCTATATCATCGTTGGC
GCCGGGTTCAGTAGTGT
FMO01430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31673-RA | 1126 | CG31673-RA | 58..1012 | 5..952 | 4345 | 97.5 | Plus |
CG31673-RB | 1221 | CG31673-RB | 58..1009 | 5..952 | 4290 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20829666..20830075 | 5..414 | 1975 | 98.8 | Plus |
2L | 23513712 | 2L | 20830279..20830614 | 411..745 | 1540 | 97.9 | Plus |
2L | 23513712 | 2L | 20830669..20830796 | 742..868 | 545 | 96.9 | Plus |
2L | 23513712 | 2L | 20830860..20830926 | 868..933 | 240 | 94 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:20 has no hits.
FMO01430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:49 Download gff for
FMO01430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31673-RA | 38..996 | 1..952 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:57 Download gff for
FMO01430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31673-RA | 54..1012 | 1..952 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:34 Download gff for
FMO01430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31673-RA | 54..1012 | 1..952 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:34 Download gff for
FMO01430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20830671..20830796 | 744..868 | 96 | -> | Plus |
2L | 20830861..20830949 | 869..952 | 91 | | Plus |
2L | 20829662..20830073 | 1..412 | 98 | -> | Plus |
2L | 20830281..20830612 | 413..743 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:57 Download gff for
FMO01430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20829662..20830073 | 1..412 | 98 | -> | Plus |
arm_2L | 20830281..20830612 | 413..743 | 97 | -> | Plus |
arm_2L | 20830671..20830796 | 744..868 | 96 | -> | Plus |
arm_2L | 20830861..20830949 | 869..952 | 91 | | Plus |