Clone FMO01430 Report

Search the DGRC for FMO01430

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:14
Well:30
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31673-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01430.5prime Sequence

1017 bp (369 high quality bases) assembled on 2008-03-18

> FMO01430.5prime
CAATCGACATGTCTCGTGCGACCAGGGCTTTTAAAGTGCTGATTTCCCAT
CCAAATGTCCCATCACCGGCTCTGGAACTGCTCCGATCCCGTGGAGCGGA
GACCATCATCTGCCAGAGTGTGCCGCCCTCGAGGGATGAGATCCTGCAAA
AGGTGCCCGGCGTGGATGCCATCTATTGGGCCCATTACCATCCCCTGAAT
GCCGGAATCCTGGATGCTGCTGGATCCCAGCTGCGTTGCGTGAGCACCAT
GTCCTCCGGAATCGATTTTGTGGATATTCCGGAGTTCCAGAAGAGGGGAA
TCCCATTGGGCCACACTCCCGGGGTGGTGAAAAATGCAGTGGCCGATCTC
GCCATTGGCTTGATGATTGCAGCCGGTCGTCACTTTCATGCCGGTCGCAC
CGAAATCGAGAGGTCCCAATGGAAAATCGAGCACATCAACTGGATGATGG
GTCAAGAGATTCGCGATTCCGTCATCGGTTTCTTTGGCTTTGGCGGTATT
AATCAGGCCATCGCCAAGCGATTGCAATGCTGGGATGTGGCCAAGATCAT
CTACCATACTCGCACCCGAAAGGAAAACGATGGCGACTTCAAGGCAGAGC
ATGTGTCGTTTGAACAACTTTTAAAGAAAGTGACTTCCTGGTGGTAGCTG
CTCCACTTACAAACGAAACTATAGAGAAATTCAATGGAGAGGCATTTAAT
CTGATGAAGAGGAGTTCTGTGTTTGTCAATGTGGCCAGAAGAGGTCTGGT
AAATCAAACTGACCTTCATGACGCCCTGACAAATGGTACAATTTCTGCCG
CAGGCTTGGATGTGACCACACCATAATCACTGCTCGCCAATAGTCCTCTT
CTCATGTGCCCAATTGTGTTATCCTTCCTCATATGGGCACTCAGACGATG
AACACTACCATTGAAATGGGATGCTTGCTGCCATATATTTTGACGCATCG
AAAGCAGCCATGATGAGCCAGCTACGCAAGCTTTCTATATCATCGTTGGC
GCCGGGTTCAGTAGTGT

FMO01430.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31673-RA 1126 CG31673-RA 58..1012 5..952 4345 97.5 Plus
CG31673-RB 1221 CG31673-RB 58..1009 5..952 4290 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20829666..20830075 5..414 1975 98.8 Plus
2L 23513712 2L 20830279..20830614 411..745 1540 97.9 Plus
2L 23513712 2L 20830669..20830796 742..868 545 96.9 Plus
2L 23513712 2L 20830860..20830926 868..933 240 94 Plus
Blast to na_te.dros performed on 2014-11-28 22:31:20 has no hits.

FMO01430.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:49 Download gff for FMO01430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31673-RA 38..996 1..952 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:57 Download gff for FMO01430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31673-RA 54..1012 1..952 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:34 Download gff for FMO01430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31673-RA 54..1012 1..952 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:34 Download gff for FMO01430.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20830671..20830796 744..868 96 -> Plus
2L 20830861..20830949 869..952 91   Plus
2L 20829662..20830073 1..412 98 -> Plus
2L 20830281..20830612 413..743 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:57 Download gff for FMO01430.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20829662..20830073 1..412 98 -> Plus
arm_2L 20830281..20830612 413..743 97 -> Plus
arm_2L 20830671..20830796 744..868 96 -> Plus
arm_2L 20830861..20830949 869..952 91   Plus