FMO01432.5prime Sequence
707 bp (707 high quality bases) assembled on 2008-03-18
> FMO01432.5prime
CAGTCGACATGACTGACTTTGGCGGAGACTCGGGTGGCCGACTAAAGGGC
GTAACTATAGTAAAGCCCATAGTGTATGGAAACATTGCCAGATCCTTCGG
CAAGAAGCGCGAGGAGGACGGACACACGCATCAGTGGAAAGTCTATTTGA
AGCCCTATTTCAACGAGGACATGTCCATTTACGTGAAAAAGGTGCATTTC
AAGCTGCACGAGAGCTACGCTAATCCGAACAGGATCGTAGTTAAGCCGCC
CTACGAGATTACCGAGACCGGATGGGGTGAATTCGAGGTGATCATCAAGA
TATACTTCAACGATCAATCAGAGCGCCCGGTTACCTGCTACCACATCCTT
AAGCTCTTCCAATCGCCTGTGGTCGATGGCGAGCTCTCCTCTAGCACCAC
TATGGACACTAAGAAGGGCCTGGTCTCGGAGTCGTATGAGGAAATAGTGT
TCCAGGAGCCCACCCAGATCTTGCAGCATTATCTCCTGCTTTCAGAACAG
AGCGCCAATGGGTTGCTAACCCATGACACTGACTTTGAGGAAAAGAAGAC
GAAAACGTTGGACAACATTGTGAATGTAAAACAGAAGGTCAAGGGGGAGA
TTGTTACACTTAAGGACAAACTAAAGCTGGCACGTGAGACCATTTCGAAG
TTCAAGGCAGAATTGGCGAAGGTGCAGAAGCAACCTGCGGCAAGCTTTCT
AGACCAT
FMO01432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gas41-RA | 840 | CG9207-RA | 92..772 | 9..689 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6949591..6950116 | 534..9 | 2630 | 100 | Minus |
| 2L | 23513712 | 2L | 6949378..6949532 | 689..535 | 775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:53 has no hits.
FMO01432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:53 Download gff for
FMO01432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9207-RA | 12..703 | 3..693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:13 Download gff for
FMO01432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gas41-RA | 84..775 | 3..693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:43 Download gff for
FMO01432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gas41-RA | 84..775 | 3..693 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:43 Download gff for
FMO01432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6949374..6949532 | 535..693 | 98 | <- | Minus |
| 2L | 6949591..6950124 | 3..534 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:13 Download gff for
FMO01432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6949374..6949532 | 535..693 | 98 | <- | Minus |
| arm_2L | 6949591..6950124 | 3..534 | 99 | | Minus |
