FMO01434.5prime Sequence
626 bp (626 high quality bases) assembled on 2008-03-18
> FMO01434.5prime
CAGTCGACATGTACACATTGATGCACGGCTTCTACAAATACATGACTCAG
AAGGACGACTACTGCGTGGTAATCCTGGGCCTGGACAATGCTGGCAAAAC
GACTTACCTGGAGGCCGCCAAGACCACGTTTACGCGTAACTATAAGGGCC
TCAATCCGAGCAAGATCACGACGACGGTGGGCCTCAACATCGGCACCATC
GACGTGCAGGGCGTACGCCTCAACTTCTGGGATCTTGGTGGCCAGCAGGA
GCTGCAATCTCTCTGGGATAAGTACTACCAGGAGTCGCATGGCGTCATCT
ACGTGATTGATTCCAACGACAGGGAGCGCATGGAAGAGTCCAAAGCGATA
TTTGACAAGATGATCAAGAACGAACTGCTGTCCGGAGTGCCTTTGCTAAT
CCTGGCCAACAAACAGGATCTGCCGGATGTGATGGGCGTGCGGGAGATCA
AGCCAGTTTTCCAGCAGGCGGGTGCTTTAATCGGGCGGCGAGATTGCCTC
ACCATTCCCGTATCCGCGCTGCACGGCGAGGGCGTGGACGAGGGCATTAA
GTGGCTGGTGGAGGCCATCAAACGACATGCGGTGGTGCGGCCGCCGCGGG
AAAACGATGCAAGCTTTCTAGACCAT
FMO01434.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arfrp1-RA | 1101 | CG7039-RA | 77..676 | 9..608 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9107675..9107929 | 354..608 | 1275 | 100 | Plus |
| X | 23542271 | X | 9107304..9107557 | 101..354 | 1270 | 100 | Plus |
| X | 23542271 | X | 9107145..9107237 | 9..101 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:38:23 has no hits.
FMO01434.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:37 Download gff for
FMO01434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7039-RA | 140..746 | 1..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:29 Download gff for
FMO01434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7039-RA | 102..708 | 1..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:03 Download gff for
FMO01434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arfrp1-RA | 70..676 | 1..608 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:03 Download gff for
FMO01434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9107138..9107237 | 1..101 | 96 | -> | Plus |
| X | 9107305..9107557 | 102..354 | 100 | -> | Plus |
| X | 9107676..9107929 | 355..608 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:29 Download gff for
FMO01434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9001171..9001270 | 1..101 | 96 | -> | Plus |
| arm_X | 9001338..9001590 | 102..354 | 100 | -> | Plus |
| arm_X | 9001709..9001962 | 355..608 | 100 | | Plus |
