FMO01436.5prime Sequence
701 bp (701 high quality bases) assembled on 2008-03-18
> FMO01436.5prime
CAGTCGACATGTCGGCCAAACCCATCCTCTATTACGCTCCCCGTAGTCCC
CCCTGTCGTGCTGTTCTGCTGACGGCCGCCGCCCTCGGTTTGGAGTTGGA
CTTGCGACTGGTCAACGTAAAGGCCGGAGAGCACAAATCCGCCGAGTTTC
TCAAGTTGAATGCGCAGCACACGATCCCCGTGCTCGATGATAACGGCACC
ATCGTGAGCGATTCGCACATTATCTGCAGCTATCTGGCAGATAAGTACGC
ACCGGAGGGCGATGATTCCCTGTATCCAAAGGATCCGGAGAAGCGGCGCC
TGGTGGATGCCCGTTTGTACTACGATTGCGGTCATCTATTCCCGCGAATC
CGTTTCATTGTCGAGCCGGTGATCTATTTCGGAGCTGGCGAGGTGCCCAG
CGATCGAGTGGCCTACCTTCAGAAGGCCTATGATGGCTTGGAGCACTGTC
TGGCTGAAGGTGATTACTTGGTGGGCGACAAGCTGACCATCGCCGATCTC
AGCTGCATCGCATCGGTGTCCACGGCCGAGGCTTTTGCGCCAATCGAGCC
GGATCAGTTTCCACGCCTGGTACAGTGGGTCAAGCGCATTCAGGCCCTTC
CATACTACCAGAAAAACAATCAGGAAGGTCTGGATATGTTGGTGGGACTG
GTTAAGGGACTTTTGGCTGAGCGACAGCAGAGGGCAAGCTTTCTAGACCA
T
FMO01436.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE11-RB | 943 | CG5224-RB | 66..738 | 9..681 | 3365 | 100 | Plus |
| GstE11-RA | 762 | CG5224-RA | 66..738 | 9..681 | 3365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18504245..18504820 | 106..681 | 2880 | 100 | Plus |
| 2R | 25286936 | 2R | 18503752..18503849 | 9..106 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:00 has no hits.
FMO01436.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:48:41 Download gff for
FMO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5224-RA | 59..741 | 3..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:04 Download gff for
FMO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE11-RA | 61..743 | 3..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:36 Download gff for
FMO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE11-RA | 61..743 | 3..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:36 Download gff for
FMO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18503747..18503849 | 3..106 | 97 | -> | Plus |
| 2R | 18504246..18504825 | 107..687 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:04 Download gff for
FMO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14391252..14391354 | 3..106 | 97 | -> | Plus |
| arm_2R | 14391751..14392330 | 107..687 | 99 | | Plus |
