FMO01437.5prime Sequence
659 bp (659 high quality bases) assembled on 2008-03-18
> FMO01437.5prime
CAGTCGACATGCTTGCTCACCTTCGACGCGTCGGATTGTCCCTGAACCGC
CAAATTCGGAGCCACATCGCATTCAATTCAAATGACAGAATGAGCAGCAC
CTGTGGCTTAGACACGGACATCGTGTGGATGGACTTGGAGATGACCGGGC
TGGACATTGAAAAGGACAAAATCCTCGAGGTGGCCTGCATCATTACGGAC
CAGGACCTGAACGTGAAGTCGGAGGGACCATGCTTTGCCATCAACCATCC
GCAGGAGGTCTACGACTCGATGAACGAGTGGTGCATGAAACATCATTACA
ATTCAGGTCTTATTGATCGATGCAAGAGCTCGGATGTGAATCTCGAAGAA
GCCTCCAATCTAGTGCTATCCTATCTCGAGAAGAACATACCAAAGCGCGC
CTGTCCGCTTGGTGGGAACTCCGTCTACACCGACCGACTATTCATTATGA
AATTCATGCCATTGGTAGATGCTTACCTGCATTACCGCATCGTCGATGTG
TCCACCATCAAGGAACTGGCCAAGCGATGGCATCCCGCAATTCTGGATTC
CGCTCCCAAAAAATCTTTCACGCATCGTAGTCTGGACGACATCCGAGAAA
GCATCAAAGAGCTTGCGTATTACAAAGCGAACTTATTTAAAGCAAGCTTT
CTAGACCAT
FMO01437.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10214-RA | 970 | CG10214-RA | 91..723 | 9..641 | 3165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23766766..23767398 | 641..9 | 3165 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:53:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1376..1429 | 375..429 | 110 | 69.1 | Plus |
FMO01437.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:00 Download gff for
FMO01437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10214-RA | 46..693 | 1..649 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:32 Download gff for
FMO01437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10214-RA | 82..729 | 1..649 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:52 Download gff for
FMO01437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10214-RA | 82..729 | 1..649 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:52 Download gff for
FMO01437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23766760..23767407 | 1..649 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:32 Download gff for
FMO01437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19592482..19593129 | 1..649 | 98 | | Minus |
