FMO01439.5prime Sequence
1041 bp (398 high quality bases) assembled on 2008-03-18
> FMO01439.5prime
CAGTCGACATGAAGCAGTTCGTTGTTCTAATGTGCCTGGTGGCCCTCACA
GCAACAGCTCCTCAGGGATACAAGTACCAACCTCAGCTGCCAGCCCTTCC
CATTGGCAATCTTCGTCCTCTGACACCCATTTCGTCAAGTGGAATATACG
CAAGTGGCGCCGTCCCATCTTTCCCACAGGCCGGTGCTCAGCCCGCGATC
GGTGTCCAGCCAGCCATTCAAGCCGTGCAGACCATCGTTGCCGCTCCTGC
TCCCGCCCCCGCTCCCGCTCCTTTGTCGATCTCACTCCCAAAGGAGACTT
TCCTTACTGCTTCGCCCCAGCAAAAACCTGATCAGCACTGTGCAGCAGCA
GCCCTCAGCAATTCGTGTACCAGCAGCAACCCGCAGCAGCCCTTTCAAAC
CCAGTTCGTCCAGCGCCCCCGTTATCGTTTCCAAGGAAATTTAAATTCCC
CCCCCCCCCCCAAAGAAAAAAAAAGAAAATGGGGGAGGGAAAAACCCCTT
TTTGGGAAAAAGGGGCCCCCCCCCAAAAAAATCCCGGATTTTTTTTTTTT
AAAGGGCCCCTCTCCCAAAATTAAAAAAAACCCCCCCCGGGCCCTGAAAG
GGGGCCCCCATAAAAAAAAAAGAAAAAAACCCCCCCCCCCCGGGCCCCCA
AAAAAACCCCCATTTTTCTGGAAACCCCCCCCCCCGGGGGGGGTTTCCCC
CCTGGGGAGACGGGGGTTAAGGCGCGGGGGGCTTTCTTTTTTTTTATAAA
CACCAAAGAGGCCCCCCCCCCCCCCACAGAAAAACCCCCCCCCACACACA
CCTCGGGGGGGGGGACACATATTTTTCAGAGAAGGGGGGGGCCCCCCCCC
GCGCTTTTGGGGGGCCCTCTACACGGGGGGGGTGTGTCGCCCCCACACCC
CAGCAGGAGACACACATCCTTCTCTCGTGGCGAGCGACAATATCCTTCCG
GCCGCGCCGCCTCTTCTGTTGCAGCTATATATAACGATGGTGCGCGGCGT
GCGCACAGATTATCTCTTTGTGAGAACCACCCTCTTCTCCC
FMO01439.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlF-RA | 1235 | CG14639-RA | 42..488 | 9..459 | 1960 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4247143..4247566 | 32..459 | 1745 | 96 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:03 has no hits.
FMO01439.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:24:57 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:06 Download gff for
FMO01439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlF-RA | 34..477 | 1..449 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:37 Download gff for
FMO01439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlF-RA | 34..477 | 1..449 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:37 Download gff for
FMO01439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4247144..4247556 | 33..449 | 96 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:06 Download gff for
FMO01439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 72866..73278 | 33..449 | 96 | <- | Plus |
