FMO01451.5prime Sequence
872 bp (872 high quality bases) assembled on 2008-03-18
> FMO01451.5prime
CAGTCGACATGGCTTTAGCTGAAATCTGCAAGATATCGAATGCTCCGTAC
ATGCGGCCCAATGCCTGGTCATCGGCGGATGTGGAGGAAGAGCAAAAAGG
GCTTATGTGCAATCTGGCCAATCCCTACACACTGGCTGCTCCGCCATTCG
AGAACCCCCTGCACAACCTTAATCAGATCCAGGCCAATGGCGACAAGACC
GGCGTCAAAATCAACTTCGATCACGGCACCACAACGTTGGGCTTCAAGTT
CAAGGGCGGCGTTCTCCTGGCAGTCGATTCCCGTGCCACGGGTGGATCGT
ACATTGGCTCCCAGTCGATGAAGAAGATCGTGGAGATCAATCAGTTCATG
CTGGGCACCTTGGCCGGTGGCGCAGCCGATTGCGTTTACTGGGACAGGGT
CCTTTCGAAGGAATGCCGCCTTCACGAGCTTCGAAACAAGGAACGCATCT
CGGTGGCCGCCGCCAGCAAGATAATGGCCAACATTGCCCACGAATACAAG
GGAATGGGTCTGAGCATGGGCATGATGCTGGCCGGTTACGATAAGCGTGG
TCCAGGCCTCTACTATGTGGACTCCGAGGGATCTCGCACGCCTGGCAATT
TGTTCTCTGTTGGTAGTGGATCGCTGTACGCCTACGGTGTCCTGGACTCT
GGCTATCATTGGGACCTGGAGGACAAGGAGGCCCAGGAGCTGGGACGTCG
CGCCATCTACCATGCCACCTTCAGGGATGCCTACTCCGGTGGTATCATTC
GCGTGTATCACATTAAGGAGGACGGCTGGGTAAACATCTCCAACACCGAC
TGCATGGAGCTGCACTACATGTACCAGGAGCAGTTGAAGCAGCAGGCCGC
TAAGGCAAGCTTTCTAGACCAT
FMO01451.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5-RA | 1139 | CG12323-RA | 96..941 | 9..854 | 4230 | 100 | Plus |
| Prosbeta5-RB | 1076 | CG12323-RB | 33..878 | 9..854 | 4230 | 100 | Plus |
| Prosbeta5R1-RA | 1107 | CG9868-RA | 373..609 | 299..535 | 255 | 74.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10820282..10820980 | 156..854 | 3495 | 100 | Plus |
| 2R | 25286936 | 2R | 10820073..10820219 | 9..155 | 735 | 100 | Plus |
| 2R | 25286936 | 2R | 23309152..23309388 | 535..299 | 255 | 73.8 | Minus |
| 2L | 23513712 | 2L | 17990976..17991021 | 492..537 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:57:31 has no hits.
FMO01451.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:18 Download gff for
FMO01451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12323-RA | 91..946 | 6..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:59 Download gff for
FMO01451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5-RB | 31..886 | 6..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:08 Download gff for
FMO01451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5-RB | 31..886 | 6..863 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:08 Download gff for
FMO01451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10820071..10820219 | 6..155 | 99 | -> | Plus |
| 2R | 10820282..10820988 | 156..863 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:59 Download gff for
FMO01451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6707576..6707724 | 6..155 | 99 | -> | Plus |
| arm_2R | 6707787..6708493 | 156..863 | 99 | | Plus |
