FMO01455.5prime Sequence
650 bp (650 high quality bases) assembled on 2008-03-18
> FMO01455.5prime
CAGTCGACATGTCGCTATCTACTCTGCTTTCGCTTGTGGATGAACTCCAG
GAGCCCCGCAGCCCCATCTACGAGCTTGGACTGGGATTGCATCCGCATTC
CCGCTACGTGCTGCCCCTTGGCACTCAGCAGCGCCGTTCCATCAACGGAT
GCCCTTGCGCATCGCCGATATGCCCATCGTCGCCCGCCGGCCAGGTTTTG
GCTTTGCGGCGCGAGATGGCCAACCGCAACGACATTCACTGGCCGGCAAC
CGCCCATGTGGGCAAGGATGGATTCCAGGTGTGCATGGACGTCGCCCAGT
TCAAGCCCAGTGAGCTCAACGTGAAGGTGGTGGACGACTCCATCTTGGTC
GAGGGCAAGCATGAGGAACGCCAGGACGACCATGGTCACATCATGCGCCA
CTTTGTGCGCCGCTACAAGGTTCCCGATGGCTACAAGGCGGAGCAAGTGG
TCTCGCAGCTGTCGTCGGATGGCGTGCTCACCGTCAGTATTCCCAAGCCG
CAGGCCGTCGAGGACAAGTCCAAGGAGCGCATCATTCAAATTCAGCAAGT
GGGACCCGCTCACCTCAACGTTAAGGCAAATGAAAGCGAGGTGAAGGGCA
AGGAGAACGGAGCACCCAACGGCAAGGACAAGGCAAGCTTTCTAGACCAT
FMO01455.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp26-RB | 1010 | CG4183-RB | 240..863 | 9..632 | 3120 | 100 | Plus |
| Hsp26-RA | 958 | CG4183-RA | 188..811 | 9..632 | 3120 | 100 | Plus |
| Hsp23-RB | 884 | CG4463-RB | 318..630 | 264..576 | 350 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9376565..9377188 | 632..9 | 3120 | 100 | Minus |
| 3L | 28110227 | 3L | 9382199..9382511 | 264..576 | 335 | 73.8 | Plus |
| 3L | 28110227 | 3L | 9384438..9384590 | 258..410 | 330 | 81 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:34:17 has no hits.
FMO01455.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:25 Download gff for
FMO01455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4183-RA | 233..868 | 1..637 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:36 Download gff for
FMO01455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp26-RA | 181..816 | 1..637 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:01 Download gff for
FMO01455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp26-RA | 181..816 | 1..637 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:01 Download gff for
FMO01455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9376560..9377195 | 1..637 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:36 Download gff for
FMO01455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9369660..9370295 | 1..637 | 99 | | Minus |
