FMO01464.5prime Sequence
986 bp (986 high quality bases) assembled on 2008-03-18
> FMO01464.5prime
CAGTCGACATGAAAAAAGTACTGGTAACAGGCGGAACTGGGCTGGTGGGC
AAGGCCCTGGAGGCTGTGATCAAGGAGCAGTCCCCAGAGGACGAGCAATG
GTTTTTTGCTGGCTCTAAAGATGCAGATTTGACAAATCTGGCCGCCACGC
AGGCACTCTTCGCCCGAGAGAAGCCCACGCATGTCATCCATCTGGCTGCA
ATGGTCGGAGGCCTGTTCCACAACATGAACAACAACCTGGACTTCTTGCG
CAACAACCTGCTCATTAACGACAATGTCCTGCAAACGGCACACGAACAGG
GCTGCGTAAAGGTGGTGTCCTGCCTGTCCACCTGCATTTTTCCGGACAAA
ACCAGCTACCCCATAGATGAGACCATGGTGCACAACGGGCCGCCGCACCC
CTCCAATTATGGTTACTCCTACGCAAAGCGACTGATAGACGTGCAGAACC
ACGCCTACCACGATAAATATGGCCGGGTGTACACCTCAGTCATTCCGTGC
AACATATTCGGTCCCCACGACAACTATAATCCAGAGGTCAGCCACGTCAT
TCCGGGCATGATCTATAGGATGCACCAGCTGGTTACGGAGAAGACTGACG
TCCCCGAAAACGACAAGGTGTTCACCGTTTTCGGAAGCGGCATGCCACTA
CGGCAGTTTGTATACTCCCGGGACCTGGCGGAGCTGATGATCTGGGTGCT
CAGGAACTACGAAAGTGTGGAGCCCATCATCCTAAGCGCGGACGAAGTGC
AAGAGGTGACCATCTTCGAGGTGGCACAGGCCGTTGCAAAAGCATTTAAT
TTTAATGGAAGACTGGTCTGTGATACGAGCAAGTCGGATGGACAGTACAA
AAAAGACTGCGTCTAATGCCAAGCTTCGCTCCTTCCTGCCAGACTACGCA
TTTACGGACTTGGAAACGGCAATCAACGCTCGGTTAGTGGTACATAGAAA
ACTACGACCAGGCTAGAAAGGCAGCTTTCTAGACAT
FMO01464.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gmer-RA | 1116 | CG3495-RA | 98..1061 | 8..970 | 4525 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22887849..22888415 | 807..241 | 2640 | 97.7 | Minus |
| 2R | 25286936 | 2R | 22887629..22887793 | 970..807 | 680 | 98.2 | Minus |
| 2R | 25286936 | 2R | 22888466..22888580 | 248..134 | 575 | 100 | Minus |
| 2R | 25286936 | 2R | 22888635..22888760 | 133..8 | 570 | 96.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:34:24 has no hits.
FMO01464.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:38 Download gff for
FMO01464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3495-RA | 92..1060 | 8..977 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:40 Download gff for
FMO01464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gmer-RA | 98..1066 | 8..977 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:03 Download gff for
FMO01464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gmer-RA | 98..1066 | 8..977 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:03 Download gff for
FMO01464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22887624..22887793 | 807..977 | 95 | <- | Minus |
| 2R | 22887850..22888407 | 249..806 | 98 | <- | Minus |
| 2R | 22888466..22888580 | 134..248 | 100 | <- | Minus |
| 2R | 22888635..22888760 | 8..133 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:40 Download gff for
FMO01464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18775147..18775316 | 807..977 | 95 | <- | Minus |
| arm_2R | 18775373..18775930 | 249..806 | 98 | <- | Minus |
| arm_2R | 18775989..18776103 | 134..248 | 100 | <- | Minus |
| arm_2R | 18776158..18776283 | 8..133 | 96 | | Minus |
