FMO01471.5prime Sequence
794 bp (794 high quality bases) assembled on 2008-03-18
> FMO01471.5prime
CAGTCGACATGTTGGCCTCTCGCTTGAATCTCCTGTTGCCCCGCGTATCC
TGGCTGCGCGGTTGCTCAACGACAGCGGTGGGCCAGAAACATCAGCGCCA
GGTGCCCACGGAGTTCGCCGTACACGATCCTCTGCAGGCTCACGCTCTAA
AGGAACAGTGCATCCTGGTTGACGCCAACGACCAAGCCATTGGGGCCGCC
TCTAAGGCAGACTGCCACCGTGTGCATCCAGAGACGAATGATGTTAAGCT
CCATCGCGCCTTCAGTGTTTTTCTCTTCAATTCTCAGGGAGAGATGCTAG
TGCAGAAGCGATCGTCTCACAAGATAACCTTCCCAAACACCTACACCAAC
GCGTGCTGCAGCCATCCGCTTTACGAAATCGAACAGGAACGTCAGGAGCG
CAACGCACAGGGCATCCGTGTGGCCGCTCAACGACGTCTCAACTACGAAC
TGGGCATTCCCACAGAGGAACTGCAGCCACAGGACTTTCGCTACCTGACC
CGCATCCACTACGCAGACACGGGCGACGGCGTGTGGGGCGAGCACGAGAT
AGACTACATCCTGTTCCTGCAAAAAGACGTGACGCTGCGTCCAAATAGCA
ACGAGGTCAGTGAGGTGCGCTACTTGCGCCGCGATAAGATCGACGAGGCG
GTGGCGAAGTTTAGTGCCCCGCTGACACCCTGGTTCTCTCTGATTCTGCA
GCATCGATTGAAACTCTGGTGGGACAATTTGCACCAGCTGGAGCAATTTG
AGGACTTGAGTAATATTCAGCGCTTTGCAAGCTTTCTAGACCAT
FMO01471.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5919-RB | 898 | CG5919-RB | 91..858 | 9..776 | 3840 | 100 | Plus |
| CG5919-RA | 1227 | CG5919-RA | 91..858 | 9..776 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21270585..21271039 | 322..776 | 2275 | 100 | Plus |
| 3R | 32079331 | 3R | 21270216..21270530 | 9..323 | 1575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:39 has no hits.
FMO01471.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:29 Download gff for
FMO01471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5919-RA | 80..858 | 9..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:33 Download gff for
FMO01471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5919-RA | 91..869 | 9..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:50 Download gff for
FMO01471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5919-RA | 91..869 | 9..788 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:50 Download gff for
FMO01471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21270216..21270530 | 9..323 | 100 | -> | Plus |
| 3R | 21270587..21271050 | 324..788 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:33 Download gff for
FMO01471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17095938..17096252 | 9..323 | 100 | -> | Plus |
| arm_3R | 17096309..17096772 | 324..788 | 98 | | Plus |
