FMO01475.5prime Sequence
650 bp (650 high quality bases) assembled on 2008-03-18
> FMO01475.5prime
CAGTCGACATGGAATCTGAAGCTCAAGAACGTACTGCACCTGTATCTGCA
AACAAAAGTGATTCATCAGCGGCACCTGTGCTCAATATATCCGGAAGGGT
CAAGTCAGAATGGAATACACCCCGTATTAGGGGCAAAAAGAAGCCGCCGG
CTGTCTTGGAAGCACCCAAAGTGAATCCGCACACATTTCCAGCGATATTA
AGCAGGATTCTACTGAAGACCAATGCTCCGCCTGCAGCTCCACCGAAGTT
TAATCCAGCCGACGGCACACAGTACCTTTGCTTCCTGTGCCTCGAGAAGC
CGGAGAGTCGAAAGCGCGTCTATCACATGTTCATCACGACTGAAAAGGAG
CTGGGAAGCGACTACGCGCACACCAGGAAGTTGTACGAGAATCGCAAGGA
ATTCATATACACCAATAATATATCCGTGGAAACAGTCTGTGCACGAGCAC
TGTACCGTCGGGTTCAAAAGAAGTTCACAGATGTACAGTGGAACAAGCTG
GGCAACGTTTTCGAGACTGACATGGTCGGACGCAGTGATGTCTGGGGTAT
ATCTAATCGAGTTTACGCTTTGCGTATCGAGGAGCACGAAAGACTATTTA
ATTACATTAAGTTTCTGAGCTCAACGAAGTGCGCAAGCTTTCTAGACCAT
FMO01475.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42365-RA | 908 | CG42365-RA | 185..809 | 8..632 | 3125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21666871..21667495 | 8..632 | 3125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:25 has no hits.
FMO01475.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:55 Download gff for
FMO01475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15675-RB | 125..759 | 8..644 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:41 Download gff for
FMO01475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42365-RA | 185..819 | 8..644 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:17 Download gff for
FMO01475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42365-RA | 185..819 | 8..644 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:17 Download gff for
FMO01475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21666871..21667505 | 8..644 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:41 Download gff for
FMO01475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17554376..17555010 | 8..644 | 99 | | Plus |
