Clone FMO01476 Report

Search the DGRC for FMO01476

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:14
Well:76
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11523-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01476.5prime Sequence

500 bp (500 high quality bases) assembled on 2008-03-18

> FMO01476.5prime
CAGTCGACATGGGCGAACCGAAAGCCACCGCAGACCCTGGGGAGGAGCAG
GCCTTCAACTGCGAGGACGAAGCCAACGCCATAATTAACGATGTTAAGGC
TCACGTCGCTGAGATTTGCATCTCATCCAAACTGGCAAGCGATGCCACGC
AAATTTACCTGAACATCCGGACTATCGAGAGCGCCACTTGCTGCGTTCAG
GTGAGCAGTCGTGGCTTCAAGATCGTCTCCTCCCAGTACGACACCATAGA
CGAGGACAGCCGGATCTCTGCACTGCTTCGCAACGGACAAGAGCAAGGCG
ACGACGAGGAGGAGGAGATATTTGAAACGCCGTACGCGCTGCTGGACAAG
ATCAGCCCCCGCTACGTCGAGTCGTTCGGCAACCAGCTGTGCCAGCAGCT
TAGAGCGCTGCAACAGATGCGAACCGAGTTCAACGAGGAGGACGAGGAGG
AGGAGGAGGAGGCGGAGGAGGAGGAGAAGAAGGCAAGCTTTCTAGACCAT

FMO01476.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11523-RA 874 CG11523-RA 126..599 9..482 2370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22266081..22266554 482..9 2370 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:30:19 has no hits.

FMO01476.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:57 Download gff for FMO01476.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11523-RA 120..593 9..482 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:51 Download gff for FMO01476.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11523-RA 126..599 9..482 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:19 Download gff for FMO01476.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11523-RA 126..599 9..482 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:19 Download gff for FMO01476.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22266081..22266554 9..482 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:51 Download gff for FMO01476.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22259181..22259654 9..482 100   Minus