FMO01480.5prime Sequence
839 bp (839 high quality bases) assembled on 2008-03-18
> FMO01480.5prime
CAGTCGACATGACGTGGAAGAAGCAGATGGCTCTGCTGGCCAAGCCATAC
TACTGGGTTAACATACTCCTGGCCATATCGTACCTTTTGGCCAAAAAGAC
GCAGTTCATCTGCACCCGCCTATTTATTCTCGCCGGAGAGGATGAAGCAT
GCGACCTGGACAGTCGTGAGGTGGAAATCTTGTTCTTCCTGCTAATCGTG
GTGATGATACGGTCACGCAAAACGGGCAGTGTCACCATGATTAACTACTT
GGCCTCGTCGTTCCTCTACACCAAAGTGGCCAACGCCATTTTGTGGGCCT
ACGCGGACTTCCGCTACGGCCTGGGCTTTCTGCTTCTATGCGTCCTGGTG
GGCATGGTGCTGCCGGAGCCCTCGTATCGCGGACCCGAGCACATCACCTA
CTTCCGCAACGCACAGGTCTTCGAGGAGGAATTGGCCAGGGACAAGCGAA
CCAGCTGGCTGATCTGCTTCTACACGGTGTGGAATCCCAGCTGCGTGAAC
TTCGCCCCCGTTTTTGCTGAGCTCTCCGCCGAGTACAACACGGACCACCT
GAAGTTCGGCAAGATTGACATTGGACGCTTTCCGGACGTGGCCCAAAAGT
ATCGCATCTCGGACAGCAGCTTCTCCCGACAGCTACCAACTGTGATCCTG
TTCCAACAGGGCAAGGAGACGGACCGCAGGCCCTGCGTCGATTCCAAGGG
TAAACTGCAAAAGTTCTTCTTCTCCAGCGACAATGTGCGCGCCACCTTTG
GCCTTAACCAGCTGTACAAGGAGGCCATCGAACGACTACCCATTGCGCCC
AAGGAGGCCAAGAAGGTCCAGGCAAGCTTTCTAGACCAT
FMO01480.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11007-RB | 1527 | CG11007-RB | 121..933 | 9..821 | 4065 | 100 | Plus |
| CG11007-RA | 1201 | CG11007-RA | 121..933 | 9..821 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19503188..19504000 | 9..821 | 4065 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:53:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtak\R1A2 | 1753 | Dtak\R1A2 TAKR1A2 1753bp | 733..773 | 5..45 | 115 | 75.6 | Plus |
FMO01480.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:01 Download gff for
FMO01480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11007-RA | 103..931 | 1..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:54 Download gff for
FMO01480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11007-RA | 114..942 | 1..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:08 Download gff for
FMO01480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11007-RA | 114..942 | 1..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:08 Download gff for
FMO01480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19503181..19504009 | 1..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:54 Download gff for
FMO01480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15390686..15391514 | 1..831 | 99 | | Plus |
