Clone FMO01481 Report

Search the DGRC for FMO01481

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:14
Well:81
Vector:pMK33-CFH-BD
Associated Gene/Transcriptl(2)06496-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01481.5prime Sequence

602 bp (602 high quality bases) assembled on 2008-03-18

> FMO01481.5prime
CAGTCGACATGGAGGCACTGGACATTCTGGAGAAGCGCATCGATGCCCTG
ACACGAGTCCTGGGTCCGGTCCAGGACTCTGAGGTGGGCGAGGGCGTGGT
CGACGCCCTGTGCTCGGCACACGCCATCCTGGGCGAAGCAACCACAGGAA
GTGCTGCACTGCAGCAGTGCGTGAAGAGATCTGACGAGCTGGAGAAGTAC
CTGGACCCCAACTTCCTGGAGGAGCACCAGCAGGTGCGCTCCAAGGAGGT
GTACCTGCAAGCCGTGGCCCCCGAGCTGCACACGCAGGCCGAGCAGCTGG
AGAGGATTAAGCAGCTGGAACCGGCCCTGGGCGCGGAGTACTTCCGCAGC
ATTCCCGCCGAGTGTCTGGAGCAGCTAAAGGGCATAACGCAGAACAACGG
GGAGTACGCGCAGCAGAGCGAACTTATCGAGGAGAGTCTGGTCCTGGCCA
TGAAGCGATATGGCGAGATCCAGGCGGGACTGCTGAGCTCCCTGGATGCC
ATGAGCGAGCGCTTGGACCAGGTAGAGGAGCGCATGGAGCAGAGGAAGCG
TGCAGAGTTGAGCAAGGATGTGCCGCCCAAGGATGCAAGCTTTCTAGACC
AT

FMO01481.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)06496-RB 1086 CG9893-RB 84..659 9..584 2880 100 Plus
l(2)06496-RA 1174 CG9893-RA 84..659 9..584 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23061935..23062510 584..9 2880 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:30:36 has no hits.

FMO01481.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:03 Download gff for FMO01481.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9893-RA 84..673 1..590 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:56 Download gff for FMO01481.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)06496-RA 75..664 1..590 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:28 Download gff for FMO01481.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)06496-RA 75..664 1..590 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:28 Download gff for FMO01481.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23061930..23062519 1..590 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:56 Download gff for FMO01481.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18949453..18950042 1..590 98   Minus