FMO01483.5prime Sequence
578 bp (578 high quality bases) assembled on 2008-03-18
> FMO01483.5prime
CAGTCGACATGGCGGCGGTTACCAAGAAGATTAAGCGCGATCCCGCGAAG
AACCCGATGAGGGATCTGCACATCCGCAAACTCTGCCTGAACATCTGCGT
GGGCGAGTCCGGTGACAGGCTGACCCGTGCCGCCAAGGTGCTGGAGCAGC
TGACTGGTCAGCAGCCAGTGTTCTCCAAGGCCCGCTACACGGTCCGTTCG
TTCGGTATTCGCCGTAACGAGAAGATCGCTGTCCACTGCACGGTGCGCGG
CGCCAAGGCTGAGGAGATTCTGGAGCGTGGCCTGAAGGTGCGCGAGTACG
AGCTGCGTCGGGAGAACTTCTCCTCCACCGGCAACTTCGGTTTCGGCATC
CAGGAACACATCGATCTGGGCATCAAGTACGATCCCTCCATCGGTATCTA
TGGTCTGGACTTCTACGTCGTCCTCGGCCGCCCTGGCTACAATGTGAACC
ACAGGAAGCGCAAGTCCGGCACTGTCGGCTTCCAGCACCGCCTCACCAAG
GAGGATGCCATGAAGTGGTTCCAGCAGAAATACGATGGTATCATCTTGAA
CACCAAGAAGGCAAGCTTTCTAGACCAT
FMO01483.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL11-RB | 1017 | CG7726-RB | 78..629 | 9..560 | 2760 | 100 | Plus |
| RpL11-RA | 710 | CG7726-RA | 78..629 | 9..560 | 2760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19442799..19443099 | 136..436 | 1505 | 100 | Plus |
| 2R | 25286936 | 2R | 19442617..19442742 | 14..139 | 630 | 100 | Plus |
| 2R | 25286936 | 2R | 19443312..19443437 | 435..560 | 630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:29:58 has no hits.
FMO01483.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:49 Download gff for
FMO01483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7726-RA | 62..622 | 1..560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:45 Download gff for
FMO01483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL11-RA | 69..629 | 1..560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:07 Download gff for
FMO01483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL11-RA | 69..629 | 1..560 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:07 Download gff for
FMO01483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19442617..19442740 | 14..137 | 100 | -> | Plus |
| 2R | 19442801..19443098 | 138..435 | 100 | -> | Plus |
| 2R | 19443313..19443437 | 436..560 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:45 Download gff for
FMO01483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15330122..15330245 | 14..137 | 100 | -> | Plus |
| arm_2R | 15330306..15330603 | 138..435 | 100 | -> | Plus |
| arm_2R | 15330818..15330942 | 436..560 | 100 | | Plus |
