FMO01484.5prime Sequence
485 bp (485 high quality bases) assembled on 2008-03-18
> FMO01484.5prime
CAGTCGACATGTCACTTGGCAATGCCGATCCCTGGCACTTGAAAAATACT
ATAGTTAAGCAAGGAATCTCCGGGTCCGCGAATAATAGCGAAAGTTTTGA
GGACAACTTCACGCCCTTGCCCTCTGGAAACGAGAGCAACGTCCAAAAGG
ACGGGAAAATCGAGCCCCTTCCGGATTCCAGCGACTATTTAAAGCTACTT
GAGCGGAAGCTGGCCCGGGTGCAGAAGGGCAACAAGTTGTTGGACAACCT
GCGAGACAAGCGGCAGGATTGCATGCGGGGATTGCTGTCTTCGGAGGGAG
TGCCCATTTCCATTTTCGAGCAGTTCCTTGAGCTAGACGCGCCCATCGAA
AGCGGTCGCCTCCATCGGCACCTGCTGCCCGTTCAGGCCGTAAACGTGGG
CGAAACTTTCCACATAGTGGAGCACGACGCTCTGCAGCAGTCGGCAGAAG
AAGCTCAGGAGGAGGAGGCAAGCTTTCTAGACCAT
FMO01484.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42558-RA | 1095 | CG42558-RA | 99..559 | 7..467 | 2305 | 100 | Plus |
| CG42557-RA | 1095 | CG42557-RA | 99..559 | 7..467 | 2305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29933636..29933902 | 201..467 | 1335 | 100 | Plus |
| 3R | 32079331 | 3R | 29933385..29933579 | 7..201 | 975 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:18 has no hits.
FMO01484.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:49:51 Download gff for
FMO01484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7866-RA | 74..534 | 7..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:39 Download gff for
FMO01484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42557-RA | 99..559 | 7..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:12 Download gff for
FMO01484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42557-RA | 99..559 | 7..467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:12 Download gff for
FMO01484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29933385..29933579 | 7..201 | 100 | -> | Plus |
| 3R | 29933637..29933902 | 202..467 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:39 Download gff for
FMO01484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25759107..25759301 | 7..201 | 100 | -> | Plus |
| arm_3R | 25759359..25759624 | 202..467 | 100 | | Plus |
