FMO01485.5prime Sequence
353 bp (353 high quality bases) assembled on 2008-03-18
> FMO01485.5prime
AAAAAACGAAGTTATCAGTCGACATGTCGCACACCATCCTATTGGTACAG
CCGGGTGCTCGTCCGGAGACCCGCACTTACTGTGACTACAAGAGCGTCAA
CGAGTGCATGGAGGGCGTGTGCAAGATCTACGAGGAGCACCTGAAGCGCC
GCAATCCAAACACTCCGACCATTACGTATGACATTAGCCAGCTATTCGAT
TTCATCGACACAATGGTGGACATTAGCTGCATGGTTTACCAGAAGAGCAC
CAATACCTATGCGCCCTACAATAAGGATTGGATCAAGGAGAAGATCTATG
TGCTGCTCCGTCAGGCGGCATTTAGTTCCAATACCGCAAGCTTTCTAGAC
CAT
FMO01485.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(r)-RE | 1332 | CG1871-RE | 312..624 | 23..335 | 1550 | 99.7 | Plus |
| e(r)-RD | 1191 | CG1871-RD | 171..483 | 23..335 | 1550 | 99.7 | Plus |
| e(r)-RC | 1199 | CG1871-RC | 179..491 | 23..335 | 1550 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8905067..8905379 | 335..23 | 1550 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:36 has no hits.
FMO01485.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:05 Download gff for
FMO01485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1871-RB | 137..459 | 14..340 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:05 Download gff for
FMO01485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(r)-RC | 173..496 | 13..340 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:40 Download gff for
FMO01485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(r)-RC | 173..496 | 13..340 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:40 Download gff for
FMO01485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8905062..8905387 | 16..340 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:05 Download gff for
FMO01485.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8799095..8799420 | 16..340 | 98 | | Minus |
