FMO01486.5prime Sequence
695 bp (695 high quality bases) assembled on 2008-03-18
> FMO01486.5prime
CAGTCGACATGCCCAAATTGATACTGTACGGCTTGGAGGCAAGTCCACCA
GTTCGTGCCGTCAAATTGACCTTGGCTGCCCTGGAGGTTCCCTACGAATT
CGTGGAGGTAAACACTCGGGCCAAGGAAAACTTCTCTGAGGAGTTTCTGA
AGAAGAATCCACAGCACACGGTGCCCACGTTGGAGGACGATGGACATTAT
ATCTGGGACTCACATGCCATTATTGCCTATCTGGTGTCCAAATACGGCAA
AACGGACAGTCTCTATCCGAAAGATCTCCTCCAGCGTGCTGTCGTGGATC
AGCGATTGCATTTCGAGTCCGGAGTGATCTTCGCTAATGCACTGAGAAGC
ATTACCAAGCCACTTTTCGCCGGTAAGCAAACGATGATTCCCAAGGAGCG
TTACGATGCGATTATTGAGGTCTATGACTTCCTGGAGAAATTCCTTGCTG
GAAATGACTACGTCGCCGGCAATCAGCTTACGATTGCCGACTTTAGTATC
ATATCAACTGTGTCCTCGTTGGAGGTCTTCGTAAAGGTGGACACGACCAA
ATATCCTCGGATAGCTGCATGGTTCAAGAGACTCCAAAAGCTGCCCTACT
ACGAGGAGGCCAACGGCAATGGTGCTCGTACATTTGAGTCCTTCATCAGA
GAGTATAATTTCACTTTCGCATCGAATGCAAGCTTTCTAGACCAT
FMO01486.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE7-RA | 765 | CG17531-RA | 32..700 | 9..677 | 3345 | 100 | Plus |
| GstE8-RB | 1122 | CG17533-RB | 26..427 | 8..409 | 755 | 79.8 | Plus |
| GstE8-RA | 758 | CG17533-RA | 26..427 | 8..409 | 755 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18406955..18407623 | 9..677 | 3345 | 100 | Plus |
| 2R | 25286936 | 2R | 18407859..18408260 | 8..409 | 735 | 78.9 | Plus |
| 2R | 25286936 | 2R | 18404667..18405121 | 42..496 | 565 | 74.9 | Plus |
| 2R | 25286936 | 2R | 18406179..18406652 | 146..619 | 480 | 73.4 | Plus |
| 2R | 25286936 | 2R | 18397152..18397321 | 322..153 | 250 | 76.5 | Minus |
| 2R | 25286936 | 2R | 18403415..18403599 | 149..333 | 205 | 74.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:07 has no hits.
FMO01486.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:50:07 Download gff for
FMO01486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17531-RA | 11..692 | 1..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:09 Download gff for
FMO01486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE7-RA | 22..703 | 1..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:39 Download gff for
FMO01486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE7-RA | 22..703 | 1..681 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:39 Download gff for
FMO01486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18406945..18407626 | 1..681 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:09 Download gff for
FMO01486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14294450..14295131 | 1..681 | 99 | | Plus |
