FMO01492.5prime Sequence
817 bp (817 high quality bases) assembled on 2008-03-18
> FMO01492.5prime
CAGTCGACATGACCAGGAAAAAGGCTCCTAAGAAAAAAACAGAGGTTGTA
TTCGACAACAAGAAACGCATAGAGTTTCTCAGTGGCTTCCGGAAAAGAAA
GAATGAGCGACGATCGCGTGCAAAGGCGGATCTGGAAAGAAACCTTAAGA
ACGAGCGCAAGCGCATACGGCAGGAGGTAAAGGATGGCTTTAACCACCTG
AAGAAATCCTTCGAACCGCTGCGCGAGCTCACCGAGGAGGACAAGGCCGA
GGAGGCGGAGCAGCAGCAGGAGGAGACCTACGAAGATGATGAAGTGCAGG
TGAAGATCGTGGAGCTGACCACCAACGATCTGGCCGCCAAGCGCAATATG
TTGGGTGCCAACACGGCAGAGGAAAGCGAACCGGAGGAGCAGGCTGACCA
GAGCGAGGAGGACGAAGCCGACCAGGCCAATAGGATACCCGGCATGGATT
TCGATCCCAACGCCCGCAAACGTAAACCCAAGCCGGAGGACGAAGAGGAG
CCGAAGGCCACAAAGTCCAACAACTCCACGCTGCCGGACATCAAGAGCAA
AAAGGATCTCGACCGCCTGATGAAGACCAAAACGCTGAAGAAAATGCACC
AGAGCAAACTGTTCAAGCAGAAGGAGCGCCTGGACAAGAAGAACAACCAG
AAGAAGGCCAAGCGGGACCGCAACAACACCATCAAGAGCGTTCCCAAGCA
TCAGCGCAAGCAGCTCAAGTACGGAAAGGCCAACCAGACCAAATACCGAA
AGGGTCGGATGGTCAACAAAAAGGAGCTGCGGCGCAACGGAATGCCGACG
CAAGCTTTCTAGACCAT
FMO01492.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| vito-RA | 951 | CG32418-RA | 69..860 | 9..799 | 3935 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5776415..5777149 | 799..66 | 3610 | 99.7 | Minus |
| 3L | 28110227 | 3L | 5777204..5777265 | 70..9 | 310 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:38:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-A | 13424 | TART-A 13424bp | 10217..10348 | 212..346 | 109 | 55.6 | Plus |
FMO01492.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:47:56 Download gff for
FMO01492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32418-RA | 25..823 | 9..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:25 Download gff for
FMO01492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vito-RA | 69..867 | 9..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:56 Download gff for
FMO01492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vito-RA | 69..867 | 9..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:56 Download gff for
FMO01492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5776408..5777144 | 71..808 | 99 | <- | Minus |
| 3L | 5777204..5777265 | 9..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:25 Download gff for
FMO01492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5769508..5770244 | 71..808 | 99 | <- | Minus |
| arm_3L | 5770304..5770365 | 9..70 | 100 | | Minus |
