FMO01494.5prime Sequence
380 bp (380 high quality bases) assembled on 2008-03-18
> FMO01494.5prime
CAGTCGACATGGCGTACGTCGATCAAAATGGTCGTCTGTGGGAGAAACGT
CCATGGGACTTGAGACGAGTTTTGGACACATTCGTGGGTATATGGTTCGC
CGTCAAACAGTTGCTTGCATCGTTCCTGTCTCCATTCACTGGAAATGATA
GCAACGGAGATAACTCCCGTCGAGGAAATGGATGGGGAAGTAGTAGCTGG
GGCGGAGGGGGCGGTGGTGGTGGCGGCGGAGGCGGTGGCGGCGGAGGCGG
TGGCGGAGGCGGAGGCGGTAGCGGTTATCGCGGAGGTGGATTAAGGCCTA
ATCGACGAATTGGGCGCATTCCGCCCCCCTCCCAATCCTGCAATGCCGGA
GGATGCTGCGGCGCAAGCTTTCTAGACCAT
FMO01494.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1840-RA | 719 | CG1840-RA | 145..498 | 9..362 | 1770 | 100 | Plus |
| CG1840-RB | 716 | CG1840-RB | 145..495 | 9..362 | 1715 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11888716..11888965 | 113..362 | 1250 | 100 | Plus |
| X | 23542271 | X | 11888572..11888657 | 28..113 | 430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:33:51 has no hits.
FMO01494.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:47:50 Download gff for
FMO01494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1840-RA | 139..501 | 9..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:21 Download gff for
FMO01494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1840-RA | 145..507 | 9..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:47 Download gff for
FMO01494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1840-RA | 145..507 | 9..373 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:47 Download gff for
FMO01494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11888496..11888514 | 9..27 | 100 | -> | Plus |
| X | 11888572..11888656 | 28..112 | 100 | -> | Plus |
| X | 11888716..11888974 | 113..373 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:21 Download gff for
FMO01494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11782529..11782547 | 9..27 | 100 | -> | Plus |
| arm_X | 11782605..11782689 | 28..112 | 100 | -> | Plus |
| arm_X | 11782749..11783007 | 113..373 | 98 | | Plus |
