FMO01505.5prime Sequence
1225 bp (1031 high quality bases) assembled on 2008-03-21
> FMO01505.5prime
ATAATACGAAGTTATCAGTCGACATGCACACTTTCAAAAGGGGCTTCTTT
TGCTCTGATCTGAGCATACGGTATCCCTACAAGGACTGCACGATCACGGT
GCCGATGCTACTGCTCATGATGCTCCTGCTCCCGATGCTCTTCGTGGCCG
TGGTGGAGATCATGCGGATCTGCAAGCGCTTCCGCACCAGGCTCTACTTC
CGCAATCTGTGGCGCGCAGAGGCCACCTTCAGCTTCGGCTTCATAGCCAC
CTATCTCACCACCGAGCTGGCGAAGCACGCCGTCGGGCGGCTGAGGCCGC
ACTTCTTCCACGGTTGCCAGCCGCGCCTCGACGATGGCAGCTCCTGCTCG
GACCTCCAGAACGCTGAGCTGTACGTGGAGCAGTTCCACTGCACTAACAA
CAACCTCTCCACGCGACAGATCCGCGAGTTGCACGTCAGTTTCCCGAGTG
CCCACAGCAGCTTGAGCTTCTATTCGATGGTCCTGCTGGCCCTCTACGTA
CACGGGGTGTGGCGGGGACGAGGGGGAGTGCGAGTCCTGCGGCACGTCCT
GCAGTTCCTGCTCCTTATGGCTGCCCTCTGCGTTTCCCTGAGCCGCGTAG
CCGACTACTGGCACCACTGGTCCGACGTCCTGGCCGGCGCCCTCCTTGGA
GTGACCTATGCCGCCATCACAGCTGCCTACGTGGGTAACCTATTGCGGCG
GCAGACCAGCTCCACCGGCAGAATCCCGCCCTCCTTGAACTACAGCCACC
ACCTGCACCACCAGCTAATGGCGGACAACAATAACTCGACGGCCTCTGCT
AAGGTCCACTTCCTGGCAGCAGCTGCTTCCGCTTCAATGACCACAACGAC
GCCGCTCGACGACATCCAGACTCCGATGTGGAGGATTCCAGGGACTGCAG
AGACTCCGAGGACTCGCACGACTCTCAGACTCGCACGCAGAGAATGAGAC
GACACGAGAGTATTACAAGTCGCAAATGTCGCGTCCCGTCACTCCGCCCA
CCGATCTGACCCACGTCGTCGCAAGCTTTCTAGAACATCGTTGGCGCGCG
GGCCAGTAAGTGTCATAATCAAATCATAATCATATCATATCAACTAGCTA
GGAAATCTGCATGACTAGGCTTGGATCCACAAATAAAATGCCGGGCGCAA
CGAGAGCTCGGAAATCCATTGACCCGAGCTTAATCTGAATTCACGGACTT
CAAGCCACCTGATATTCACATATCT
FMO01505.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| laza-RA | 2316 | CG11440-RA | 573..1575 | 23..1020 | 4845 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22459557..22460559 | 1020..23 | 4720 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:55 has no hits.
FMO01505.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:14 Download gff for
FMO01505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11440-RA | 622..1627 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:10 Download gff for
FMO01505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 570..1575 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:49 Download gff for
FMO01505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| laza-RA | 570..1575 | 17..1020 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:49 Download gff for
FMO01505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22459557..22460562 | 17..1020 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:10 Download gff for
FMO01505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22452657..22453662 | 17..1020 | 99 | | Minus |
