FMO01507.5prime Sequence
984 bp (984 high quality bases) assembled on 2008-03-21
> FMO01507.5prime
AAAACAAAGTTATCAGTCGACATGTTTATTCTCGACCGAATACTGCCTTT
TATTTTTAGCTATATAAGGCCCTTTATAAAGTGGTTCCTGCACGCCTTCA
CCAGGCTCTCGGAGCTCCAGAGGATTTGCTATGGAGCGAAGGCCGGAGCC
AGCCGAACCAGCCAGGTGGAAAGGTCCCTCACATTGTCCAAAAGGCCGCA
GATACGACGACTTGTACTTGACCTTGATGAGGCGGCGCCATATGTGAGCA
ACGCGGAGCTGCTGGATTTCGCTCCTCGCGCTGCTCGCATTGTGATGCAG
GCGAAACGCATCAAGAACAATGTCCACCCGGATTTTGCTCGGCTCTTCGG
CACATGCGTGACGAGTATCTGGGGCTACCGCAGACTGATGCATCAGGTGG
AACAGCTGCGGGCGGAGAAATACGACTCGGATAACCTCGACCACGAGCAA
AAGCTGTTGCGATTGTGGCAATTGCTGATGCCAGACACTCCCCTCACCGG
TCGCGTGACCAAACAGTGGCAGGACATCGGCTTCCAGGGCGACGATCCGA
AGACGGACTTTCGGGGAATGGGCATGCTCGGGCTAGAGAACCTTCTCTAC
TTTGCAACTGCCTATAACGACGCCGCCAAACATGTCCTGCTGCACTCGAT
GCATCCCACCCTGGGTTACACCTACGCCATTGTCGGCATTAACCTCACCT
CCATGGCCTTCAATCTAGTGAAAACGGGCGCCGCCAAAACCCACTTCTAC
AATTTGGTGGTGCAGCACAGACAGGACTTTAGCACCGTGGAGGATTTCCA
CAAGTTGTACTGCTATCTGTTCTTCGAGTTTGACCGCTTTTGGATGGAGA
GCGACCCACGAAACATTATGGACTTCCGCGAGATTTACCAGTCATTTGAA
ATTACAAAACTAGAAGGCCTTGCACAATGATAGCACTATTTTAAGACCAT
TTGGTTGTAGATCCGTCGCAAGCTTTCTAGACAT
FMO01507.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10068-RA | 1657 | CG10068-RA | 206..1153 | 22..967 | 4630 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7126782..7127473 | 961..271 | 3300 | 99.4 | Minus |
| 3R | 32079331 | 3R | 7127573..7127822 | 271..22 | 1250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:25:02 has no hits.
FMO01507.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:53:15 Download gff for
FMO01507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10068-RA | 202..1158 | 15..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:13 Download gff for
FMO01507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10068-RA | 200..1156 | 15..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:53 Download gff for
FMO01507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10068-RA | 200..1156 | 15..971 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:53 Download gff for
FMO01507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7126771..7127472 | 272..971 | 99 | <- | Minus |
| 3R | 7127573..7127828 | 15..271 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:13 Download gff for
FMO01507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2952493..2953194 | 272..971 | 99 | <- | Minus |
| arm_3R | 2953295..2953550 | 15..271 | 98 | | Minus |
